RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 GM2AP17900 193 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 KELP23276 732 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 MAPK10P53779 464 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 BCL2L1Q07817 233 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 TCEAL1Q15170 157 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 PHF19Q5T6S3 580 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 DPPA4Q7L190 304 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 PELI3Q8N2H9 469 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 ACRBPQ8NEB7 543 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 SLC35G2Q8TBE7 412 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 ARHGAP9Q9BRR9 750 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 FAM117AQ9C073 453 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 DHX35Q9H5Z1 703 aaKnown RBP23.24■■□□□ 1.31
SSNA1-203ENST00000463511 WDR26Q9H7D7 661 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 SP110Q9HB58 689 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 FOXJ2Q9P0K8 574 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 ANAPC7Q9UJX3 599 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 BSNQ9UPA5 3926 aa23.24■■□□□ 1.31
SSNA1-203ENST00000463511 RCCD1A6NED2 376 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 TNFRSF10CO14798 259 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 WISP1O95388 367 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 ACOX1Q15067 660 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 MAP9Q49MG5 647 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 MANEAQ5SRI9 462 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 ARHGAP36Q6ZRI8 547 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 ZFAND4Q86XD8 727 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 SLITRK4Q8IW52 837 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 CCDC112Q8NEF3 446 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 USP7Q93009 1102 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 TMEM159Q96B96 161 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 CMKLR1Q99788 373 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 SUDS3Q9H7L9 328 aaPredicted RBP23.23■■□□□ 1.31
SSNA1-203ENST00000463511 LUC7LQ9NQ29 371 aaKnown RBP23.23■■□□□ 1.31
SSNA1-203ENST00000463511 SEPT10Q9P0V9 454 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 IP6K2Q9UHH9 426 aa23.23■■□□□ 1.31
SSNA1-203ENST00000463511 HEMK1Q9Y5R4 338 aaPredicted RBP23.23■■□□□ 1.31
SSNA1-203ENST00000463511 SPTA1P02549 2419 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 PRSS38A1L453 326 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 DFFAO00273 331 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 NUDT21O43809 227 aaKnown RBP23.22■■□□□ 1.31
SSNA1-203ENST00000463511 MTA2O94776 668 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 ITGB2P05107 769 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 TRIM23P36406 574 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 CCZ1BP86790 482 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 CCZ1P86791 482 aaPredicted RBP23.22■■□□□ 1.31
SSNA1-203ENST00000463511 PIGHQ14442 188 aaPredicted RBP23.22■■□□□ 1.31
SSNA1-203ENST00000463511 AFMIDQ63HM1 303 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 ARHGAP12Q8IWW6 846 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 NPWQ8N729 165 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 NIPA2Q8N8Q9 360 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 PEBP4Q96S96 227 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 SNRNP25Q9BV90 132 aaKnown RBP23.22■■□□□ 1.31
SSNA1-203ENST00000463511 TRIM4Q9C037 500 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 SEMA6CQ9H3T2 930 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 RDH14Q9HBH5 336 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 PCDHGA4Q9Y5G9 962 aa23.22■■□□□ 1.31
SSNA1-203ENST00000463511 CYSRT1A8MQ03 144 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 C9orf172C9J069 976 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 MYO1FO00160 1098 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 TRAFD1O14545 582 aaPredicted RBP23.21■■□□□ 1.31
SSNA1-203ENST00000463511 DAPK3O43293 454 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 RNF8O76064 485 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 IPO7O95373 1038 aaKnown RBP23.21■■□□□ 1.31
SSNA1-203ENST00000463511 HOXC4P09017 264 aaPredicted RBP23.21■■□□□ 1.31
SSNA1-203ENST00000463511 SCNN1BP51168 640 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 MAZP56270 477 aaKnown RBP23.21■■□□□ 1.31
SSNA1-203ENST00000463511 POLR2LP62875 67 aaKnown RBP23.21■■□□□ 1.31
SSNA1-203ENST00000463511 C16orf72Q14CZ0 275 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 PNCKQ6P2M8 343 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 RFX8Q6ZV50 586 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 RHOT2Q8IXI1 618 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 KIAA1524Q8TCG1 905 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 NSMCE3Q96MG7 304 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 KCTD15Q96SI1 283 aaPredicted RBP23.21■■□□□ 1.31
SSNA1-203ENST00000463511 DESI2Q9BSY9 194 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 PCSK1NQ9UHG2 260 aa23.21■■□□□ 1.31
SSNA1-203ENST00000463511 ARHGAP6O43182 974 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 LRCH4O75427 683 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 FAM87AP0C7U9 286 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 MIPP30301 263 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 NFKB2Q00653 900 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 B4GALNT1Q00973 533 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 AMZ1Q400G9 498 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 ERMARDQ5T6L9 678 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 CARS2Q9HA77 564 aaKnown RBP23.2■■□□□ 1.3
SSNA1-203ENST00000463511 SPATS2LQ9NUQ6 558 aaKnown RBP23.2■■□□□ 1.3
SSNA1-203ENST00000463511 B4GALT6Q9UBX8 382 aa23.2■■□□□ 1.3
SSNA1-203ENST00000463511 TTC24A2A3L6 582 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-203ENST00000463511 PJA2O43164 708 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 B4GAT1O43505 415 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 MYCLP1P12525 358 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-203ENST00000463511 CCNB1P14635 433 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 ERCC2P18074 760 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 WT1P19544 449 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-203ENST00000463511 VAV2P52735 878 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 OR1D5P58170 312 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 AP1S1P61966 158 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 IL10RBQ08334 325 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 NSUN2Q08J23 767 aaKnown RBP eCLIP23.19■■□□□ 1.3
SSNA1-203ENST00000463511 RFTN1Q14699 578 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms