RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SMTNL2Q2TAL5 461 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 SLC30A9Q6PML9 568 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 PRICKLE2Q7Z3G6 844 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 LRRC49Q8IUZ0 686 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 SLITRK4Q8IW52 837 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 SCRN2Q96FV2 425 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 CSPG4P5Q96PW8 444 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 MGME1Q9BQP7 344 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 RDH14Q9HBH5 336 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 SUFUQ9UMX1 484 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 BPTFQ12830 3046 aa15.37■□□□□ 0.05
SKA3-204ENST00000462482 DDX3XO00571 662 aaKnown RBP eCLIP15.36■□□□□ 0.053e-14■□□□□ 9.2
SKA3-204ENST00000462482 KALRNO60229 2985 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 PGLSO95336 258 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 ECEL1O95672 775 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 FGF1P05230 155 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 CEACAM5P06731 702 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 PYGLP06737 847 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 TEAD1P28347 426 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 SSR1P43307 286 aaKnown RBP15.36■□□□□ 0.05
SKA3-204ENST00000462482 EPHB1P54762 984 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 KCNC4Q03721 635 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 NFATC3Q12968 1075 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 TRA2AQ13595 282 aaKnown RBP eCLIP15.36■□□□□ 0.05
SKA3-204ENST00000462482 ANO6Q4KMQ2 910 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 TDRD12Q587J7 1177 aaKnown RBP15.36■□□□□ 0.05
SKA3-204ENST00000462482 DOK6Q6PKX4 331 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 Q6ZVL8 140 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 CYP4V2Q6ZWL3 525 aaPredicted RBP15.36■□□□□ 0.05
SKA3-204ENST00000462482 HSD11B1LQ7Z5J1 315 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 POLNQ7Z5Q5 900 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 ZFAND4Q86XD8 727 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 SFTPA2Q8IWL1 248 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 TP53INP2Q8IXH6 220 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 DPYSL5Q9BPU6 564 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 FRMD8Q9BZ67 464 aaPredicted RBP15.36■□□□□ 0.05
SKA3-204ENST00000462482 HSD3B7Q9H2F3 369 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 SEMA6CQ9H3T2 930 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 CLMPQ9H6B4 373 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 SHROOM3Q8TF72 1996 aa15.36■□□□□ 0.05
SKA3-204ENST00000462482 STMND1H3BQB6 276 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 B4GAT1O43505 415 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 MAFKO60675 156 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 IVLP07476 585 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 CR2P20023 1033 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 CA4P22748 312 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 AK4P27144 223 aaPredicted RBP15.35■□□□□ 0.05
SKA3-204ENST00000462482 CSTF2P33240 577 aaKnown RBP eCLIP15.35■□□□□ 0.05
SKA3-204ENST00000462482 ETV5P41161 510 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 ACTR1BP42025 376 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 ACTR1AP61163 376 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 MAXP61244 160 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 CTBSQ01459 385 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 TRAF2Q12933 501 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 ZNF438Q7Z4V0 828 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 VASH2Q86V25 355 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 NRROSQ86YC3 692 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 PELI3Q8N2H9 469 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 TEKT4Q8WW24 435 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 EXTL1Q92935 676 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 AP2M1Q96CW1 435 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 OR2M4Q96R27 311 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 TAAR9Q96RI9 348 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 BPIFA3Q9BQP9 254 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 POLR1EQ9GZS1 481 aaKnown RBP15.35■□□□□ 0.05
SKA3-204ENST00000462482 NT5MQ9NPB1 228 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 ETNK2Q9NVF9 386 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 FOXJ2Q9P0K8 574 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 DNPEPQ9ULA0 475 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 SLC17A4Q9Y2C5 497 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 BZW2Q9Y6E2 419 aaKnown RBP15.35■□□□□ 0.05
SKA3-204ENST00000462482 CHD5Q8TDI0 1954 aa15.35■□□□□ 0.05
SKA3-204ENST00000462482 NPIPB15A6NHN6 443 aaPredicted RBP15.34■□□□□ 0.05
SKA3-204ENST00000462482 C9orf172C9J069 976 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 SERPINC1P01008 464 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 RARAP10276 462 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 SKILP12757 684 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 ZNF30P17039 623 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 CTPS1P17812 591 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 LHCGRP22888 699 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 CES1P23141 567 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 IL1R2P27930 398 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 ADCY8P40145 1251 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 TPM4P67936 248 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 DPTQ07507 201 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 NR1D2Q14995 579 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 C16orf72Q14CZ0 275 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 HADHQ16836 314 aaKnown RBP15.34■□□□□ 0.05
SKA3-204ENST00000462482 CCDC122Q5T0U0 273 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 C17orf82Q86X59 251 aaPredicted RBP15.34■□□□□ 0.05
SKA3-204ENST00000462482 PGBD5Q8N414 524 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 AGBL5Q8NDL9 886 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 AHCYL2Q96HN2 611 aaKnown RBP15.34■□□□□ 0.05
SKA3-204ENST00000462482 CCDC74BQ96LY2 380 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 NSMCE3Q96MG7 304 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 MCCC1Q96RQ3 725 aaPredicted RBP15.34■□□□□ 0.05
SKA3-204ENST00000462482 NUDT22Q9BRQ3 303 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 ISCUQ9H1K1 167 aa15.34■□□□□ 0.05
SKA3-204ENST00000462482 STN1Q9H668 368 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms