RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SPA17Q15506 151 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CNGA3Q16281 694 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 C14orf28Q4W4Y0 310 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 PERM1Q5SV97 790 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 NCBP2-AS2Q69YL0 99 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CYP4V2Q6ZWL3 525 aaPredicted RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 RAB11FIP2Q7L804 512 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 GALNT13Q8IUC8 556 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CCNJLQ8IV13 435 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 TP53INP2Q8IXH6 220 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 NRSN1Q8IZ57 195 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 KYQ8NBH2 561 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 LPCAT1Q8NF37 534 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 EXD1Q8NHP7 514 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 SLC35G2Q8TBE7 412 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 ZDHHC1Q8WTX9 485 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 TMEM159Q96B96 161 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 DTD2Q96FN9 168 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CMKLR1Q99788 373 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 TRIM5Q9C035 493 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CLPBQ9H078 707 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 LRRN3Q9H3W5 708 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 NHEJ1Q9H9Q4 299 aaPredicted RBP8.86□□□□□ -0.99
LDB1-203ENST00000461873 PCDH9Q9HC56 1237 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 ABHD10Q9NUJ1 306 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CD84Q9UIB8 345 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 CHKBQ9Y259 395 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 PCDHB11Q9Y5F2 797 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 DMXL2Q8TDJ6 3036 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 FREM2Q5SZK8 3169 aa8.86□□□□□ -0.99
LDB1-203ENST00000461873 FAM208BQ5VWN6 2430 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 C1orf232A0A0U1RR37 186 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CAPN8A6NHC0 703 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TLX3O43711 291 aaPredicted RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 KRT1P04264 644 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CELA2BP08218 269 aaPredicted RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 CD48P09326 243 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 SLC2A4P14672 509 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 PNLIPP16233 465 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CR2P20023 1033 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 KDELR1P24390 212 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 ITPKBP27987 946 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 ALDH4A1P30038 563 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 HNRNPH3P31942 346 aaKnown RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 TRIM23P36406 574 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CETN2P41208 172 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 RPL26P61254 145 aaKnown RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 CCL7P80098 99 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CDK3Q00526 305 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 DSC2Q02487 901 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TRAF2Q12933 501 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TFDP2Q14188 446 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 AMZ1Q400G9 498 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 PHF19Q5T6S3 580 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CCDC181Q5TID7 509 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 LRRC66Q68CR7 880 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TXNRD3NBQ6F5E7 133 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 SLC30A9Q6PML9 568 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 Q6ZVL8 140 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 PIM3Q86V86 326 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CCDC50Q8IVM0 306 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 RHOT1Q8IXI2 618 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 PGBD5Q8N414 524 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TEX26Q8N6G2 289 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 CCDC112Q8NEF3 446 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 OR1E3Q8WZA6 343 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 LRRC45Q96CN5 670 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 HIC2Q96JB3 615 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 COQ10AQ96MF6 247 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 SRPK1Q96SB4 655 aaKnown RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 MLPHQ9BV36 600 aaPredicted RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 TEX101Q9BY14 249 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 BRD8Q9H0E9 1235 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TMEM168Q9H0V1 697 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 FGF22Q9HCT0 170 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 RAD18Q9NS91 495 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 TRNAU1APQ9NX07 287 aaKnown RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 ZNHIT2Q9UHR6 403 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 RPL26L1Q9UNX3 145 aaKnown RBP8.85□□□□□ -0.99
LDB1-203ENST00000461873 PCDHGA8Q9Y5G5 932 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 ENTPD2Q9Y5L3 495 aa8.85□□□□□ -0.99
LDB1-203ENST00000461873 LY6G6EA0A0G2JKS1 128 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 A0A0J9YYE9 177 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 TEX51A0A1B0GUA7 166 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 NPIPB15A6NHN6 443 aaPredicted RBP8.84□□□□□ -0.99
LDB1-203ENST00000461873 PLD2O14939 933 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 NUDT21O43809 227 aaKnown RBP8.84□□□□□ -0.99
LDB1-203ENST00000461873 MFAP3LO75121 409 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 DXOO77932 396 aaKnown RBP8.84□□□□□ -0.99
LDB1-203ENST00000461873 JCHAINP01591 159 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 TRBC1P01850 177 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 SLC4A1P02730 911 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 TEAD1P28347 426 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 CYLC1P35663 651 aaPredicted RBP8.84□□□□□ -0.99
LDB1-203ENST00000461873 ACTR1BP42025 376 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 CD86P42081 329 aa8.84□□□□□ -0.99
LDB1-203ENST00000461873 MAGEA1P43355 309 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms