RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 CPT1BQ92523 772 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 SNX19Q92543 992 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 KLK6Q92876 244 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 SRPK1Q96SB4 655 aaKnown RBP13.8□□□□□ -0.2
CHRD-209ENST00000461120 SLC17A9Q9BYT1 436 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 EBF2Q9HAK2 575 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 MAGEE1Q9HCI5 957 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 ZNF711Q9Y462 761 aa13.8□□□□□ -0.2
CHRD-209ENST00000461120 C1orf232A0A0U1RR37 186 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 TCRBV7S3A2A0A539 114 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 PSMD11O00231 422 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 DNALI1O14645 258 aaPredicted RBP13.79□□□□□ -0.2
CHRD-209ENST00000461120 LZTS3O60299 673 aaPredicted RBP13.79□□□□□ -0.2
CHRD-209ENST00000461120 TM7SF2O76062 418 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 CLDN7O95471 211 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 GM2AP17900 193 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 CD27P26842 260 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 NUDT1P36639 197 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 GRIA1P42261 906 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 NOVA1P51513 510 aaKnown RBP13.79□□□□□ -0.2
CHRD-209ENST00000461120 STC1P52823 247 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 PTSQ03393 145 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 MSLNQ13421 630 aaPredicted RBP13.79□□□□□ -0.2
CHRD-209ENST00000461120 SETMARQ53H47 684 aaPredicted RBP13.79□□□□□ -0.2
CHRD-209ENST00000461120 WDR45BQ5MNZ6 344 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 ANKRD22Q5VYY1 191 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 LYSMD4Q5XG99 296 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 PPP1R21Q6ZMI0 780 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 LYSMD3Q7Z3D4 306 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 HSD11B1LQ7Z5J1 315 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 MMGT1Q8N4V1 131 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 CEP112Q8N8E3 955 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 OR52K1Q8NGK4 314 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 ASB12Q8WXK4 309 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 DNASE2BQ8WZ79 361 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 ORAI3Q9BRQ5 295 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 L2HGDHQ9H9P8 463 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 CASS4Q9NQ75 786 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 HACD3Q9P035 362 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 EIF2B4Q9UI10 523 aaKnown RBP13.79□□□□□ -0.2
CHRD-209ENST00000461120 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 COQ6Q9Y2Z9 468 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 TRPM6Q9BX84 2022 aa13.79□□□□□ -0.2
CHRD-209ENST00000461120 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 CYSRT1A8MQ03 144 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 AURKAO14965 403 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 SLC31A1O15431 190 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 RECQL5O94762 991 aaPredicted RBP13.78□□□□□ -0.2
CHRD-209ENST00000461120 TMEM63AO94886 807 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 PAK4O96013 591 aaPredicted RBP13.78□□□□□ -0.2
CHRD-209ENST00000461120 C1SP09871 688 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 TPH1P17752 444 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 ITPKAP23677 461 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 MAOBP27338 520 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 CREB5Q02930 508 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 CDH17Q12864 832 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 SGCGQ13326 291 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 ACOX1Q15067 660 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 AGERQ15109 404 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 DENND2CQ68D51 928 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 TMC3Q7Z5M5 1100 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 TTC30BQ8N4P2 665 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 NAT8LQ8N9F0 302 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 NOA1Q8NC60 698 aaKnown RBP13.78□□□□□ -0.2
CHRD-209ENST00000461120 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 EID2BQ96D98 161 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 LOXL4Q96JB6 756 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 SCNM1Q9BWG6 230 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 GPR63Q9BZJ6 419 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
CHRD-209ENST00000461120 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 TNRC6BQ9UPQ9 1833 aaKnown RBP13.78□□□□□ -0.2
CHRD-209ENST00000461120 SPTA1P02549 2419 aa13.78□□□□□ -0.2
CHRD-209ENST00000461120 EFCAB8A8MWE9 144 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 RAD51BO15315 384 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 SPINK2P20155 84 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 HNRNPA2B1P22626 353 aaKnown RBP13.77□□□□□ -0.21
CHRD-209ENST00000461120 RPL21P46778 160 aaKnown RBP13.77□□□□□ -0.21
CHRD-209ENST00000461120 RNASEH2BQ5TBB1 312 aaKnown RBP13.77□□□□□ -0.21
CHRD-209ENST00000461120 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 C19orf48Q6RUI8 117 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 RFLNAQ6ZTI6 216 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 Q6ZVL8 140 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 ZNF534Q76KX8 674 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 CYP2U1Q7Z449 544 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 GLT6D1Q7Z4J2 308 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 TECPR1Q7Z6L1 1165 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 PCGF5Q86SE9 256 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 RAVER1Q8IY67 606 aaKnown RBP13.77□□□□□ -0.21
CHRD-209ENST00000461120 RGL4Q8IZJ4 473 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 DNAAF3Q8N9W5 541 aa13.77□□□□□ -0.21
CHRD-209ENST00000461120 MCUQ8NE86 351 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms