RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	GDF9	O60383	454 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	GOLGA6D	P0CG33	693 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	THEGL	P0DJG4	465 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	PTGIR	P43119	386 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	CTSK	P43235	329 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	TNNT3	P45378	269 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	TERF1	P54274	439 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	NXPH1	P58417	271 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	PFN3	P60673	137 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	BASP1	P80723	227 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	TEAD4	Q15561	434 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	PRAMEF14	Q5SWL7	426 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826		Q6ZSR6	202 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	TMC3	Q7Z5M5	1100 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	IQCH	Q86VS3	1027 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	KIAA2013	Q8IYS2	634 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	SLC22A18AS	Q8N1D0	253 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	OR52K1	Q8NGK4	314 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	SCAMP4	Q969E2	229 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	KLHDC7B	Q96G42	594 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	AGAP2	Q99490	1192 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	C1QTNF7	Q9BXJ2	289 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	GPR63	Q9BZJ6	419 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	ABCG8	Q9H221	673 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	ZFYVE1	Q9HBF4	777 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	ARNT2	Q9HBZ2	717 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	GPR27	Q9NS67	375 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	GOLGA6A	Q9NYA3	693 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	PCYOX1	Q9UHG3	505 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	DNAH14	Q0VDD8	3507 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	CFAP54	Q96N23	3096 aa		13.98	□□□□□ -0.17
HDLBP-229	ENST00000460826	TCRBV7S3A2	A0A539	114 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826		A6NNZ2	444 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	ERI2	A8K979	691 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	URI1	O94763	535 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	SUN1	O94901	812 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	ECEL1	O95672	775 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	SOD1	P00441	154 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	APRT	P07741	180 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	TPH1	P17752	444 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	SPINT3	P49223	89 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	C21orf59	P57076	290 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	GPS1	Q13098	491 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	INPP5A	Q14642	412 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	AASDH	Q4L235	1098 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	ESRP1	Q6NXG1	681 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	C4orf22	Q6V702	233 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	GPR26	Q8NDV2	337 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	CCHCR1	Q8TD31	782 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	GRK7	Q8WTQ7	553 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	FUBP1	Q96AE4	644 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	EDEM2	Q9BV94	578 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	GTPBP2	Q9BX10	602 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	IL21R	Q9HBE5	538 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	BPIFA1	Q9NP55	256 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	KCTD3	Q9Y597	815 aa		13.97	□□□□□ -0.17
HDLBP-229	ENST00000460826	CNOT1	A5YKK6	2376 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826		E7EVH7	732 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	CCDC188	H7C350	402 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	CDX4	O14627	284 aa	Predicted RBP	13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	BPI	P17213	487 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	LMAN1	P49257	510 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	C2orf54	Q08AI8	447 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	MTM1	Q13496	603 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	KCNJ11	Q14654	390 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	PTPRCAP	Q14761	206 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	HLA-B	Q31612	363 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	ANKRD22	Q5VYY1	191 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	PNCK	Q6P2M8	343 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	ZNF765	Q7L2R6	523 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	GLT6D1	Q7Z4J2	308 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	NRSN1	Q8IZ57	195 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	SPATA4	Q8NEY3	305 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	SLCO2A1	Q92959	643 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	AP2M1	Q96CW1	435 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	SRPK1	Q96SB4	655 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	KRT12	Q99456	494 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	APOO	Q9BUR5	198 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	RIOK2	Q9BVS4	552 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	TRABD	Q9H4I3	376 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	EIF2B3	Q9NR50	452 aa	Known RBP	13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	PKD2L2	Q9NZM6	624 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	HACD3	Q9P035	362 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	IL17C	Q9P0M4	197 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	CDC23	Q9UJX2	597 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	OR1A2	Q9Y585	309 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	ARL5A	Q9Y689	179 aa		13.96	□□□□□ -0.17
HDLBP-229	ENST00000460826	KIF2A	O00139	706 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	TMEM63A	O94886	807 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	GAS8	O95995	478 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	TUBB4A	P04350	444 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	SYP	P08247	313 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	TPSB2	P20231	275 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	HMGCL	P35914	325 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	TRIM23	P36406	574 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	RABIF	P47224	123 aa		13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	MRPS25	P82663	173 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-229	ENST00000460826	DPT	Q07507	201 aa		13.95	□□□□□ -0.18

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