RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 NAT14Q8WUY8 206 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 UCMAQ8WVF2 138 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 MCCC1Q96RQ3 725 aaPredicted RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 HACD3Q9P035 362 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 CRYL1Q9Y2S2 319 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 PKP3Q9Y446 797 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 MTF2Q9Y483 593 aaPredicted RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 EGFP01133 1207 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 IL1BP01584 269 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 CHRM1P11229 460 aaPredicted RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 SPRP35270 261 aaPredicted RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 PTSQ03393 145 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 LAMB3Q13751 1172 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 ELAVL3Q14576 367 aaKnown RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 ZNF805Q5CZA5 627 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 RBM20Q5T481 1227 aaKnown RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 PTCRAQ6ISU1 281 aaPredicted RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 BRAT1Q6PJG6 821 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 TTC7BQ86TV6 843 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 CCDC97Q96F63 343 aaPredicted RBP16.82■□□□□ 0.28
NELFCD-201ENST00000460601 PCDH12Q9NPG4 1184 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 PRSS16Q9NQE7 514 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 CATSPERZQ9NTU4 200 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 SENP1Q9P0U3 644 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 SLC17A7Q9P2U7 560 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 SLC39A10Q9ULF5 831 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 PPM1HQ9ULR3 514 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 STON1Q9Y6Q2 735 aa16.82■□□□□ 0.28
NELFCD-201ENST00000460601 SCN8AQ9UQD0 1980 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 GAPDHSO14556 408 aaPredicted RBP16.81■□□□□ 0.28
NELFCD-201ENST00000460601 TIMP2P16035 220 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 BPIP17213 487 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 XIAPP98170 497 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 ARMC3Q5W041 872 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 TPRG1Q6ZUI0 275 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 GPATCH11Q8N954 259 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 GDAP1Q8TB36 358 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 PIP4K2CQ8TBX8 421 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 MTBPQ96DY7 904 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 LYSMD1Q96S90 227 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 RHOJQ9H4E5 214 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 SNX15Q9NRS6 342 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 RIMKLBQ9ULI2 386 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 PPIL1Q9Y3C6 166 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 FAM47DPA6NHR8 397 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 S1PR4O95977 384 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 CNTFP26441 200 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 FOXN2P32314 431 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 MDH1P40925 334 aaKnown RBP16.81■□□□□ 0.28
NELFCD-201ENST00000460601 CSE1LP55060 971 aaKnown RBP16.81■□□□□ 0.28
NELFCD-201ENST00000460601 PDE1CQ14123 709 aaPredicted RBP16.81■□□□□ 0.28
NELFCD-201ENST00000460601 TERF2Q15554 542 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 NDUFAF2Q8N183 169 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 ARFGAP2Q8N6H7 521 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 CALML6Q8TD86 181 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 TCP10LQ8TDR4 215 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 OR8D1Q8WZ84 308 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 SPOCK2Q92563 424 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 CAPS2Q9BXY5 557 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 CD84Q9UIB8 345 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 GRID1Q9ULK0 1009 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 STARD13Q9Y3M8 1113 aa16.81■□□□□ 0.28
NELFCD-201ENST00000460601 PHGDHO43175 533 aaKnown RBP16.8■□□□□ 0.28
NELFCD-201ENST00000460601 DNAJC6O75061 913 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 TYK2P29597 1187 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 LEPRP48357 1165 aaKnown RBP16.8■□□□□ 0.28
NELFCD-201ENST00000460601 IRF9Q00978 393 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 ZRANB3Q5FWF4 1079 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 KIAA1211LQ6NV74 962 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 AFTPHQ6ULP2 937 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 CEP97Q8IW35 865 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 GPR26Q8NDV2 337 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 ATXN2LQ8WWM7 1075 aaKnown RBP16.8■□□□□ 0.28
NELFCD-201ENST00000460601 ARRDC3Q96B67 414 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 FAM136AQ96C01 138 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 GPR22Q99680 433 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 OSBPL1AQ9BXW6 950 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 RABEP2Q9H5N1 569 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 IL26Q9NPH9 171 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 NSMCE4AQ9NXX6 385 aa16.8■□□□□ 0.28
NELFCD-201ENST00000460601 FAM95CA0A1B0GW59 222 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 SHISA7A6NL88 538 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.283e-8■□□□□ 9.2
NELFCD-201ENST00000460601 OR1I1O60431 355 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 PRAMEF1O95521 474 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 C1SP09871 688 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 PSMA3P25788 255 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 HADHAP40939 763 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 CD151P48509 253 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 STC1P52823 247 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 WDR4P57081 412 aaKnown RBP16.79■□□□□ 0.28
NELFCD-201ENST00000460601 POLR2LP62875 67 aaKnown RBP16.79■□□□□ 0.28
NELFCD-201ENST00000460601 GNGT1P63211 74 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 SLC18A2Q05940 514 aa16.79■□□□□ 0.28
NELFCD-201ENST00000460601 FASTKD1Q53R41 847 aaKnown RBP16.79■□□□□ 0.28
NELFCD-201ENST00000460601 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms