RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 RFPL4BQ6ZWI9 263 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 PRPF39Q86UA1 669 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 LRRC6Q86X45 466 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 KLHDC8BQ8IXV7 354 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 CPXM2Q8N436 756 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 PPM1NQ8N819 430 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 ING5Q8WYH8 240 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 SMG7Q92540 1137 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 CINPQ9BW66 212 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 SPATA16Q9BXB7 569 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 PLAC1Q9HBJ0 212 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 VPS45Q9NRW7 570 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 DLGAP2Q9P1A6 1054 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 PFDN2Q9UHV9 154 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 SCOCQ9UIL1 159 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 MRPS23Q9Y3D9 190 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 ACTL7AQ9Y615 435 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 E2F8A0AVK6 867 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 CASQ2O14958 399 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 CYBBP04839 570 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 PRKCHP24723 683 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 WNT3AP56704 352 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 NR1H3Q13133 447 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 CBX2Q14781 532 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 CTC1Q2NKJ3 1217 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 MPPE1Q53F39 396 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 ADGRD1Q6QNK2 874 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 CES3Q6UWW8 571 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 TMC5Q6UXY8 1006 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 PGBD5Q8N414 524 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 USP13Q92995 863 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 ZNF707Q96C28 371 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 MRGPRX2Q96LB1 330 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 TTC1Q99614 292 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 SEMA3CQ99985 751 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 ACE2Q9BYF1 805 aaPredicted RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 SHCBP1LQ9BZQ2 653 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 LMAN2LQ9H0V9 348 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 CNOT10Q9H9A5 744 aaKnown RBP10.41□□□□□ -0.74
HERC4-207ENST00000460168 SEPT3Q9UH03 358 aa10.41□□□□□ -0.74
HERC4-207ENST00000460168 C5orf42Q9H799 3197 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 TRAV6A0A075B6T7 132 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 A0A088AWK7 358 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 MAGEB16A2A368 324 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 TTC24A2A3L6 582 aaPredicted RBP10.4□□□□□ -0.74
HERC4-207ENST00000460168 GFRA2O00451 464 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 KATNA1O75449 491 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 GUCY1A3Q02108 690 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 RELAQ04206 551 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 TNK2Q07912 1038 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 RFTN1Q14699 578 aaPredicted RBP10.4□□□□□ -0.74
HERC4-207ENST00000460168 POU6F1Q14863 301 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 MAPRE2Q15555 327 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 DUSP6Q16828 381 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 PRSS36Q5K4E3 855 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 STEAP4Q687X5 459 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 GALNT7Q86SF2 657 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 C12orf76Q8N812 135 aaPredicted RBP10.4□□□□□ -0.74
HERC4-207ENST00000460168 WFDC5Q8TCV5 224 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 SLC44A1Q8WWI5 657 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 ZNF669Q96BR6 464 aaPredicted RBP10.4□□□□□ -0.74
HERC4-207ENST00000460168 EFHD2Q96C19 240 aaPredicted RBP10.4□□□□□ -0.74
HERC4-207ENST00000460168 NELL2Q99435 816 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 GDF15Q99988 308 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 FEM1AQ9BSK4 669 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 HAUS8Q9BT25 410 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 ZMYM5Q9UJ78 669 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 MIA3Q5JRA6 1907 aa10.4□□□□□ -0.74
HERC4-207ENST00000460168 MYO9BQ13459 2157 aa10.4□□□□□ -0.75
HERC4-207ENST00000460168 KRBA1A5PL33 1030 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CXorf49A8MYA2 514 aaPredicted RBP10.39□□□□□ -0.75
HERC4-207ENST00000460168 TMEM114B3SHH9 223 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 FBP2O00757 339 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 HDAC3O15379 428 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SNAP91O60641 907 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 PRAMEF12O95522 483 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SERPINF2P08697 491 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 BRAFP15056 766 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CEBPBP17676 345 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ADRA1AP35348 466 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CSKP41240 450 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MTHFRP42898 656 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SMAD1Q15797 465 aaKnown RBP10.39□□□□□ -0.75
HERC4-207ENST00000460168 MOGQ16653 247 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SPANXN3Q5MJ09 141 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MPP7Q5T2T1 576 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 LINGO4Q6UY18 593 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 RANBP10Q6VN20 620 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SLC26A11Q86WA9 606 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 UNC5BQ8IZJ1 945 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SLC25A41Q8N5S1 370 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ARRDC2Q8TBH0 407 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 DCAKDQ8WVC6 231 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 TTC17Q96AE7 1141 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 EXOC2Q96KP1 924 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 GBP5Q96PP8 586 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CCT8L2Q96SF2 557 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 DHRS4Q9BTZ2 278 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms