RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CBARPQ8N350 705 aaPredicted RBP12.81□□□□□ -0.36
COL18A1-206ENST00000459895 MINDY1Q8N5J2 469 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 MFSD2AQ8NA29 543 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 MAGEE1Q9HCI5 957 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 EIF2B3Q9NR50 452 aaKnown RBP12.81□□□□□ -0.36
COL18A1-206ENST00000459895 GOLGA6AQ9NYA3 693 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 FNDC3AQ9Y2H6 1198 aaKnown RBP12.81□□□□□ -0.36
COL18A1-206ENST00000459895 NEU2Q9Y3R4 380 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 OR1A2Q9Y585 309 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 E7EVH7 732 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 TLR4O00206 839 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 BUD23O43709 281 aaKnown RBP12.8□□□□□ -0.36
COL18A1-206ENST00000459895 TMEM63AO94886 807 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 SUN1O94901 812 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 ECEL1O95672 775 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 GAS8O95995 478 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 APRTP07741 180 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 GRIA1P42261 906 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 RABIFP47224 123 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 SPINT3P49223 89 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 IL9RQ01113 521 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 GPS1Q13098 491 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 PTK6Q13882 451 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 PDE1CQ14123 709 aaPredicted RBP12.8□□□□□ -0.36
COL18A1-206ENST00000459895 KCNJ11Q14654 390 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 KCTD16Q68DU8 428 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 RAET1GQ6H3X3 334 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 CCDC70Q6NSX1 233 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 Q6ZSR6 202 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 MICALCLQ6ZW33 695 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF534Q76KX8 674 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF765Q7L2R6 523 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 HEATR4Q86WZ0 1026 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 OR52K1Q8NGK4 314 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 SCAMP4Q969E2 229 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 AGAP2Q99490 1192 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 GPR63Q9BZJ6 419 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 ABCG8Q9H221 673 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 WDR26Q9H7D7 661 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 ZFYVE1Q9HBF4 777 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 GDF3Q9NR23 364 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 PKD2L2Q9NZM6 624 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 NFKBIL1Q9UBC1 381 aaPredicted RBP12.8□□□□□ -0.36
COL18A1-206ENST00000459895 PNMA8BQ9ULN7 279 aaPredicted RBP12.8□□□□□ -0.36
COL18A1-206ENST00000459895 ARL5AQ9Y689 179 aa12.8□□□□□ -0.36
COL18A1-206ENST00000459895 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TCRBV7S3A2A0A539 114 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ERI2A8K979 691 aaKnown RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 GPR39O43194 453 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 CER1O95813 267 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 SYPP08247 313 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TSHRP16473 764 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 BPIP17213 487 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 PTGIRP43119 386 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 LMAN1P49257 510 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF140P52738 457 aaPredicted RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 KIAA1024LP59773 190 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 DCDC1P59894 354 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 LMNB2Q03252 620 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 OVGP1Q12889 678 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 MSLNQ13421 630 aaPredicted RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 SEPT6Q14141 434 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 FZD2Q14332 565 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 INPP5AQ14642 412 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 POU6F1Q14863 301 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF423Q2M1K9 1284 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 HENMT1Q5T8I9 393 aaKnown RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ANKRD22Q5VYY1 191 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 MACC1Q6ZN28 852 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TMC3Q7Z5M5 1100 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TRIM74Q86UV6 250 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 PARGQ86W56 976 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 GPR26Q8NDV2 337 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 CCHCR1Q8TD31 782 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 SLCO2A1Q92959 643 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 FUBP1Q96AE4 644 aaKnown RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 LRRC45Q96CN5 670 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 AP2M1Q96CW1 435 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 KLHDC7BQ96G42 594 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 PDXPQ96GD0 296 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TRIM51Q9BSJ1 452 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 RIOK2Q9BVS4 552 aaKnown RBP12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ZDHHC5Q9C0B5 715 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TRABDQ9H4I3 376 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 GAREM1Q9H706 876 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 ARNT2Q9HBZ2 717 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 BPIFA1Q9NP55 256 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 TMEM9BQ9NQ34 198 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 HACD3Q9P035 362 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 PCYOX1Q9UHG3 505 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 HS3ST3A1Q9Y663 406 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 FAM186AA6NE01 2351 aa12.79□□□□□ -0.36
COL18A1-206ENST00000459895 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 FADS2P1A8MWK0 482 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms