RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 LRRC66Q68CR7 880 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 RAET1GQ6H3X3 334 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 NPNTQ6UXI9 565 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 NRSN1Q8IZ57 195 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 SYCE1Q8N0S2 351 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 CBARPQ8N350 705 aaPredicted RBP17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 NAT6Q93015 286 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 TSACCQ96A04 125 aaPredicted RBP17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 AGAP3Q96P47 875 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 SRPK1Q96SB4 655 aaKnown RBP17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 VAT1Q99536 393 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 MLPHQ9BV36 600 aaPredicted RBP17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 SLC25A51Q9H1U9 297 aa17.51■□□□□ 0.39
SCARNA2-201ENST00000458748 hCG_1818297A0A087WSY0 165 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 LY6G6EA0A0G2JKS1 128 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 RGSL1A5PLK6 1076 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 HACD1B0YJ81 288 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 YY2O15391 372 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 PJA2O43164 708 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 GCATO75600 419 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 ZNF189O75820 626 aaPredicted RBP17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 LHCGRP22888 699 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 CTNNA1P35221 906 aaKnown RBP17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 GSDMDP57764 484 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 ZBTB17Q13105 803 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 TARDBPQ13148 414 aaKnown RBP eCLIP17.5■□□□□ 0.39not detected■■■■■ 85
SCARNA2-201ENST00000458748 C1orf61Q13536 156 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 TEX44Q53QW1 395 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 CRTC1Q6UUV9 634 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 Q6ZVL8 140 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 ZNF765Q7L2R6 523 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 HSD11B1LQ7Z5J1 315 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 NLRP8Q86W28 1048 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 DCBLD1Q8N8Z6 715 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 SPC24Q8NBT2 197 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 WDR48Q8TAF3 677 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 LRRN4Q8WUT4 740 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 AP2M1Q96CW1 435 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 NXPE2Q96DL1 559 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 IMP4Q96G21 291 aaKnown RBP17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 LYSMD1Q96S90 227 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 BOCQ9BWV1 1114 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 TEX101Q9BY14 249 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 NRSN2Q9GZP1 204 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 GOLPH3Q9H4A6 298 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 CAAP1Q9H8G2 361 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 MOSPD1Q9UJG1 213 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 PNMA8BQ9ULN7 279 aaPredicted RBP17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 CLCA2Q9UQC9 943 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 EFR3BQ9Y2G0 817 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 RAXQ9Y2V3 346 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 PCDHA3Q9Y5H8 950 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 U3KQA8 63 aa17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 DSPP15924 2871 aaKnown RBP17.5■□□□□ 0.39
SCARNA2-201ENST00000458748 CPED1A4D0V7 1026 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 ANKRD66B4E2M5 251 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 OPA1O60313 960 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 PTMAP06454 111 aaKnown RBP17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 GM2AP17900 193 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 GPR1P46091 355 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 CLDN6P56747 220 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 RWDD2BP57060 319 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 SKOR1P84550 965 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 PTSQ03393 145 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 PRKD1Q15139 912 aaPredicted RBP17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 RAD9BQ6WBX8 426 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 TSPAN33Q86UF1 283 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 UBL4BQ8N7F7 174 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 CNTD1Q8N815 330 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 ARL10Q8N8L6 244 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 OR6C4Q8NGE1 309 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 MAPK15Q8TD08 544 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 RBM15Q96T37 977 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 TCEAL2Q9H3H9 227 aaPredicted RBP17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 RAD18Q9NS91 495 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 PKD2L2Q9NZM6 624 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 TFR2Q9UP52 801 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 GPSM3Q9Y4H4 160 aa17.49■□□□□ 0.39
SCARNA2-201ENST00000458748 C1orf232A0A0U1RR37 186 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 EME2A4GXA9 379 aaPredicted RBP17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 APOC4-APOC2K7ER74 178 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 MT-CO3P00414 261 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 APOC2P02655 101 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 MMP2P08253 660 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 CTNNA2P26232 953 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 STC1P52823 247 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 CDK3Q00526 305 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 CYP4F3Q08477 520 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 XRCC4Q13426 336 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 CDKN3Q16667 212 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 CDCP2Q5VXM1 449 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 BBS12Q6ZW61 710 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 EFL1Q7Z2Z2 1120 aaKnown RBP17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 TECPR1Q7Z6L1 1165 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 TAF8Q7Z7C8 310 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 ACRBPQ8NEB7 543 aa17.48■□□□□ 0.39
SCARNA2-201ENST00000458748 UBE2Q2Q8WVN8 375 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms