RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PSMD8P48556 350 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 SEMG2Q02383 582 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 CBX3Q13185 183 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 TIGD2Q4W5G0 525 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 ZNF433Q8N7K0 673 aaPredicted RBP19.65■□□□□ 0.74
SNX27-204ENST00000458013 ZNF558Q96NG5 402 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 VAT1Q99536 393 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 RACGAP1Q9H0H5 632 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 NEK6Q9HC98 313 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 ALAS2P22557 587 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 SLC6A2P23975 617 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 CAMK1Q14012 370 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 TREML2Q5T2D2 321 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 CUZD1Q86UP6 607 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 PDP1Q9P0J1 537 aaPredicted RBP19.65■□□□□ 0.74
SNX27-204ENST00000458013 CEMIPQ8WUJ3 1361 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 SEMA3DO95025 777 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 CHRM5P08912 532 aaPredicted RBP19.65■□□□□ 0.74
SNX27-204ENST00000458013 NCK1P16333 377 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 CLK3P49761 638 aaKnown RBP19.65■□□□□ 0.74
SNX27-204ENST00000458013 RFWD3Q6PCD5 774 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 TMEM161BQ8NDZ6 487 aa19.65■□□□□ 0.74
SNX27-204ENST00000458013 KCTD15Q96SI1 283 aaPredicted RBP19.65■□□□□ 0.74
SNX27-204ENST00000458013 WRAP53Q9BUR4 548 aaKnown RBP19.65■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3DA0A087WVF3 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3IA0A087WXS9 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3EA0A087X179 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3KA0A087X1G2 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 C15orf38-AP3S2A0A0A6YYH1 394 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3FA6NER0 549 aaPredicted RBP19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3LB9A6J9 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 SERPINA6P08185 405 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3HP0C7X1 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3GQ6DHY5 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3CQ6IPX1 549 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 ARPINQ7Z6K5 226 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 TBC1D3Q8IZP1 549 aaPredicted RBP19.64■□□□□ 0.74
SNX27-204ENST00000458013 TRPV3Q8NET8 790 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 FGFBP2Q9BYJ0 223 aa19.64■□□□□ 0.74
SNX27-204ENST00000458013 GPN3Q9UHW5 284 aaPredicted RBP19.64■□□□□ 0.74
SNX27-204ENST00000458013 CPSF4LA6NMK7 179 aaKnown RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 LOC110117498-PIK3R3F6TDL0 507 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 ELFN1P0C7U0 828 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 CADM2Q8N3J6 435 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 PTCD3Q96EY7 689 aaKnown RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 DSN1Q9H410 356 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 C11orf16Q9NQ32 467 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 ETAA1Q9NY74 926 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 RAP2CQ9Y3L5 183 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 POU2F1P14859 743 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 PSRC1Q6PGN9 363 aaPredicted RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 GPR180Q86V85 440 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 PPM1MQ96MI6 270 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 HBEGFQ99075 208 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 DHRS7Q9Y394 339 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 NRXN1Q9ULB1 1477 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 LRRIQ1Q96JM4 1722 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 KCNU1A8MYU2 1149 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 SLC22A3O75751 556 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 OTCP00480 354 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 CITED4Q96RK1 184 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 EBNA1BP2Q99848 306 aaKnown RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 PCYOX1Q9UHG3 505 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 OAS3Q9Y6K5 1087 aaKnown RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 NCANO14594 1321 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 SUV39H1O43463 412 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 GABRB2P47870 512 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 MPP1Q00013 466 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 MXD1Q05195 221 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 SIM2Q14190 667 aaPredicted RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 CBX2Q14781 532 aaPredicted RBP19.64■□□□□ 0.73
SNX27-204ENST00000458013 Q96MT0 163 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 TMEM134Q9H6X4 195 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 TBC1D30Q9Y2I9 924 aa19.64■□□□□ 0.73
SNX27-204ENST00000458013 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
SNX27-204ENST00000458013 ULK3Q6PHR2 472 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 CXXC5Q7LFL8 322 aaKnown RBP19.63■□□□□ 0.73
SNX27-204ENST00000458013 PJA1Q8NG27 643 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 ZFP28Q8NHY6 868 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 GIPC3Q8TF64 312 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 CIB1Q99828 191 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 PRRG4Q9BZD6 226 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 DPP7Q9UHL4 492 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 PCDHGC5Q9Y5F6 944 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 WNT7AO00755 349 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 PDK4Q16654 411 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 STX16-NPEPL1H3BU86 382 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 STX16O14662 325 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 FPGTO14772 594 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 STAT5AP42229 794 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 GPR65Q8IYL9 337 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 IRF6O14896 467 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 UGT2B17O75795 530 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 MRPS5P82675 430 aaKnown RBP19.63■□□□□ 0.73
SNX27-204ENST00000458013 SLC5A9Q2M3M2 681 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 ALG11Q2TAA5 492 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 VPS26BQ4G0F5 336 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 LRRC17Q8N6Y2 441 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 ADCY4Q8NFM4 1077 aa19.63■□□□□ 0.73
SNX27-204ENST00000458013 RP9Q8TA86 221 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms