RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ADGRE3Q9BY15 652 aa16.34■□□□□ 0.21
LSS-205ENST00000457828 TSC22D4Q9Y3Q8 395 aa16.34■□□□□ 0.21
LSS-205ENST00000457828 SNX10Q9Y5X0 201 aa16.34■□□□□ 0.21
LSS-205ENST00000457828 ZBTB14O43829 449 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 NRP2O60462 931 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 SCIMPQ6UWF3 145 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 ADCK1Q86TW2 530 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 SLC22A9Q8IVM8 553 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 FUBP3Q96I24 572 aaKnown RBP eCLIP16.33■□□□□ 0.21
LSS-205ENST00000457828 C9orf16Q9BUW7 83 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 BCO2Q9BYV7 579 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 BLOC1S6Q9UL45 172 aa16.33■□□□□ 0.21
LSS-205ENST00000457828 DHRS12A0PJE2 317 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 A8MX80 341 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 SLC10A2Q12908 348 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 PFKFB4Q16877 469 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 SMG8Q8ND04 991 aaKnown RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 MRPL57Q9BQC6 102 aaKnown RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 WDR83Q9BRX9 315 aaKnown RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 TMEM175Q9BSA9 504 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 SEPT3Q9UH03 358 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 BTRCQ9Y297 605 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 YJEFN3A6XGL0 299 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 MT-CYBP00156 380 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 ASLP04424 464 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 ARHGDIAP52565 204 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 PLCL1Q15111 1095 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 ZYG11AQ6WRX3 759 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 DNAJB7Q7Z6W7 309 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 CUZD1Q86UP6 607 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 MIER2Q8N344 545 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 CBR4Q8N4T8 237 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 TCF12Q99081 682 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 VAT1Q99536 393 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 SLC39A3Q9BRY0 314 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 DGCR6LQ9BY27 220 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 ZDHHC2Q9UIJ5 367 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 FGF10O15520 208 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 SNNO75324 88 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 ESRRBO95718 433 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 GJA1P17302 382 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 CORO1AP31146 461 aaKnown RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 ZNF135P52742 658 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 CHRNB3Q05901 458 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 ZBTB17Q13105 803 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 TRIM25Q14258 630 aaKnown RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 SPPL2CQ8IUH8 684 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 HJURPQ8NCD3 748 aaPredicted RBP16.33■□□□□ 0.2
LSS-205ENST00000457828 PLEKHG4BQ96PX9 1271 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 PLGRKTQ9HBL7 147 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 NUMBLQ9Y6R0 609 aa16.33■□□□□ 0.2
LSS-205ENST00000457828 PTGES3LE9PB15 166 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 IGSF6O95976 241 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 TIMP1P01033 207 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 PTPN3P26045 913 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 ITGADQ13349 1161 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 POM121L1PQ3SYA9 428 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 TEX44Q53QW1 395 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 EPGNQ6UW88 154 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 CHPFQ8IZ52 775 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 RDH11Q8TC12 318 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 GRIN3AQ8TCU5 1115 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 PDLIM7Q9NR12 457 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 CPQQ9Y646 472 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 A0A1W2PRU2 124 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 LTA4HP09960 611 aaKnown RBP16.32■□□□□ 0.2
LSS-205ENST00000457828 DNAJC14Q6Y2X3 702 aaPredicted RBP16.32■□□□□ 0.2
LSS-205ENST00000457828 OFCC1Q8IZS5 231 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 ZNF557Q8N988 423 aaPredicted RBP16.32■□□□□ 0.2
LSS-205ENST00000457828 KLHL23Q8NBE8 558 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 IGSF21Q96ID5 467 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 EXOC2Q96KP1 924 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 SLC9A7Q96T83 725 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 TIMMDC1Q9NPL8 285 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 TLR9Q9NR96 1032 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 NAA20P61599 178 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 SOX4Q06945 474 aaPredicted RBP16.32■□□□□ 0.2
LSS-205ENST00000457828 ZNF284Q2VY69 593 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 ESRP1Q6NXG1 681 aaKnown RBP16.32■□□□□ 0.2
LSS-205ENST00000457828 FAM162AQ96A26 154 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 NSMCE2Q96MF7 247 aa16.32■□□□□ 0.2
LSS-205ENST00000457828 SEMA4BQ9NPR2 832 aaPredicted RBP16.32■□□□□ 0.2
LSS-205ENST00000457828 SLC38A8A6NNN8 435 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 MYO1GB0I1T2 1018 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 PCNAP12004 261 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 CYP4F8P98187 520 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 POU4F1Q01851 419 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 MRNIPQ6NTE8 343 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 ANGPTL8Q6UXH0 198 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 TIFABQ6ZNK6 161 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 LDB1Q86U70 411 aaPredicted RBP16.31■□□□□ 0.2
LSS-205ENST00000457828 CNTD1Q8N815 330 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 MIOSQ9NXC5 875 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 YIPF1Q9Y548 306 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 MAXP61244 160 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 BCL2L1Q07817 233 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 FBXO48Q5FWF7 155 aa16.31■□□□□ 0.2
LSS-205ENST00000457828 BRMS1LQ5PSV4 323 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms