RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 GIMAP4Q9NUV9 329 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 B3GNT2Q9NY97 397 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF624Q9P2J8 865 aaPredicted RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 DAPK2Q9UIK4 370 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PIN4Q9Y237 131 aaKnown RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PTPN22Q9Y2R2 807 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PCDHB5Q9Y5E4 795 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 KCNE2Q9Y6J6 123 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 DUSP10Q9Y6W6 482 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TET1Q8NFU7 2136 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 A0A1W2PQ72 361 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 CHURC1-FNTBB4DL54 471 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 CACNB4O00305 520 aaPredicted RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 RTCAO00442 366 aaKnown RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF623O75123 536 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TM7SF2O76062 418 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 SLC4A1P02730 911 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 KRT8P05787 483 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 H2AFZP0C0S5 128 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TMEM253P0C7T8 217 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 CPB1P15086 417 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TIMP2P16035 220 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ATF4P18848 351 aaPredicted RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PBLDP30039 288 aaPredicted RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 FOXK2Q01167 660 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 GALNT2Q10471 571 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 DUSP4Q13115 394 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 UGP2Q16851 508 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 WSCD2Q2TBF2 565 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF699Q32M78 642 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 AARDQ4LEZ3 155 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM47CQ5HY64 1035 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 HES5Q5TA89 166 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ELP2Q6IA86 826 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 CCDC137Q6PK04 289 aaKnown RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PAOXQ6QHF9 649 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 GPRIN3Q6ZVF9 776 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 H2AFVQ71UI9 128 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 COMTD1Q86VU5 262 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 MIB1Q86YT6 1006 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 DTX3Q8N9I9 347 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 SRFBP1Q8NEF9 429 aaKnown RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 FBXO30Q8TB52 745 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 DEPDC1BQ8WUY9 529 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PIK3R3Q92569 461 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 YIPF5Q969M3 257 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 MARC2Q969Z3 335 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ELMO3Q96BJ8 720 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 RIPOR3Q96MK2 946 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 GLT1D1Q96MS3 346 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PCDHB18PQ96TA0 734 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TLR10Q9BXR5 811 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 SLC2A11Q9BYW1 496 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 SLC19A3Q9BZV2 496 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TWSG1Q9GZX9 223 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 CXCL16Q9H2A7 254 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PPA2Q9H2U2 334 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 CRLF2Q9HC73 371 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 RPS6KA6Q9UK32 745 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ST3GAL5Q9UNP4 418 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 ENTPD4Q9Y227 616 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 MRPS23Q9Y3D9 190 aaKnown RBP6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TRAF6Q9Y4K3 522 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 TSC2P49815 1807 aa6.85□□□□□ -1.31
CUBNP3-201ENST00000457461 PCP4L1A6NKN8 68 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CLDN25C9JDP6 229 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 H3BM21 787 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ARVCFO00192 962 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 WRBO00258 174 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 PODXLO00592 558 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 GPR182O15218 404 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ZBTB24O43167 697 aaPredicted RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 DNAJA2O60884 412 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ALDH1A2O94788 518 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 PIGNO95427 931 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 S100A9P06702 114 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CDH1P12830 882 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 UNGP13051 313 aaPredicted RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CSF2RAP15509 400 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TNFAIP3P21580 790 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 HOXC12P31275 282 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ADH7P40394 386 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 GNPDA1P46926 289 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 SCNN1GP51170 649 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 NKX2-5P52952 324 aaPredicted RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 MAPK12P53778 367 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 GALCP54803 685 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 IL9RQ01113 521 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 INCA1Q0VD86 236 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 THOC5Q13769 683 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 DLG2Q15700 870 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 LTB4RQ15722 352 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 YIF1BQ5BJH7 314 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF425Q6IV72 752 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CGB2Q6NT52 195 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 RETSATQ6NUM9 610 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms