RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ALX1Q15699 326 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 GPR19Q15760 415 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 TYSND1Q2T9J0 566 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MYLK3Q32MK0 819 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 ANO6Q4KMQ2 910 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 SLC9B1Q4ZJI4 515 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 FAM76BQ5HYJ3 339 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 RARS2Q5T160 578 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 THEM4Q5T1C6 240 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MPP7Q5T2T1 576 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PRAMEF20Q5VT98 475 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 TRAT1Q6PIZ9 186 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 LRRC31Q6UY01 552 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 FAM83HQ6ZRV2 1179 aaPredicted RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 RRAGAQ7L523 313 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 KIF18BQ86Y91 864 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 SCN4BQ8IWT1 228 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 AOPEPQ8N6M6 819 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PLD5Q8N7P1 536 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 CCNYL1Q8N7R7 359 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 CLRN3Q8NCR9 226 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 SETD9Q8NE22 299 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MCPH1Q8NEM0 835 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 NEK11Q8NG66 645 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 OR6J1Q8NGC5 347 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 SETD6Q8TBK2 473 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PHOSPHO2Q8TCD6 241 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 KCNG4Q8TDN1 519 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 SLC13A3Q8WWT9 602 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 EXTL1Q92935 676 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 RMDN1Q96DB5 314 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PGAP3Q96FM1 320 aaPredicted RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 FAM89AQ96GI7 184 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 TPD52L3Q96J77 140 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 TRNT1Q96Q11 434 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 CDRT15Q96T59 188 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 UHRF1Q96T88 793 aaPredicted RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 PIP5K1AQ99755 562 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 GPR63Q9BZJ6 419 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 GPR61Q9BZJ8 451 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 DCLK3Q9C098 648 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 WNT8AQ9H1J5 351 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 IKZF4Q9H2S9 585 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 C12orf65Q9H3J6 166 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 TMEM206Q9H813 350 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 LRRC40Q9H9A6 602 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MRPL44Q9H9J2 332 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 CENPMQ9NSP4 180 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 FAM120CQ9NX05 1096 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 SELENONQ9NZV5 590 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 VPS54Q9P1Q0 977 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 FEM1BQ9UK73 627 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 LIPT1Q9Y234 373 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.46□□□□□ -1.545e-8■■■□□ 14.9
VPS41-209ENST00000457055 TNS3Q68CZ2 1445 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 ERBINQ96RT1 1412 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PDE4DIPQ5VU43 2346 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 COL24A1Q17RW2 1714 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 FMN2Q9NZ56 1722 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 TMEM120BA0PK00 339 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 GSAPA4D1B5 854 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 TMEM210A6NLX4 147 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 HIP1O00291 1037 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CLDN3O15551 220 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ADAM20O43506 726 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 GAS7O60861 476 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 H2AFYO75367 372 aaKnown RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 HEXIM1O94992 359 aaKnown RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 GAS8O95995 478 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CYC1P08574 325 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ZCCHC18P0CG32 403 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ERVK-10P10266 1014 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 TSHRP16473 764 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 SLC9A1P19634 815 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 NR2F2P24468 414 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 HTR1BP28222 390 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 LRPAP1P30533 357 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 MCM7P33993 719 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 GRK5P34947 590 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 GJA4P35212 333 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CASP3P42574 277 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 RGS19P49795 217 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 MECP2P51608 486 aaKnown RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 KCNQ1P51787 676 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CLCNKAP51800 687 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 STX17P56962 302 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 IL13RA1P78552 427 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 OCRLQ01968 901 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 GAD2Q05329 585 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 SCRN3Q0VDG4 424 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 TRA2AQ13595 282 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS41-209ENST00000457055 TOB2Q14106 344 aaPredicted RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 PON2Q15165 354 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 SEC23BQ15437 767 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 DGKDQ16760 1214 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CCDC142Q17RM4 750 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 TWISTNBQ3B726 338 aaPredicted RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 PABPC1LQ4VXU2 614 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms