RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
CLIP4-208ENST00000456385 PSME4Q14997 1843 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 FAM47E-STBD1D6RA91 191 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 MSI1O43347 362 aaKnown RBP10.31□□□□□ -0.76
CLIP4-208ENST00000456385 GMNNO75496 209 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 UGT2B4P06133 528 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 GSTM2P28161 218 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 ALDH4A1P30038 563 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 NDUFV1P49821 464 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 BCAT1P54687 386 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 FOXA1P55317 472 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 BACE1P56817 501 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
CLIP4-208ENST00000456385 FPGSQ05932 587 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 BST2Q10589 180 aaKnown RBP10.31□□□□□ -0.76
CLIP4-208ENST00000456385 CTF1Q16619 201 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 MEP1AQ16819 746 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 PKN3Q6P5Z2 889 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 ANKRD49Q8WVL7 239 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 CTRCQ99895 268 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 CHID1Q9BWS9 393 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 ALOXE3Q9BYJ1 711 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 NTN4Q9HB63 628 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 MRGBPQ9NV56 204 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 HACD3Q9P035 362 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 EVLQ9UI08 416 aaPredicted RBP10.31□□□□□ -0.76
CLIP4-208ENST00000456385 ZNF639Q9UID6 485 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 ANAPC2Q9UJX6 822 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 USP21Q9UK80 565 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 ERVK-11Q9UQG0 969 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 PCDHGA8Q9Y5G5 932 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 PCDHA9Q9Y5H5 950 aa10.31□□□□□ -0.76
CLIP4-208ENST00000456385 A0A087WZ62 844 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ERI2A8K979 691 aaKnown RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 H0YAE9 185 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 PSMD11O00231 422 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 PCNAP12004 261 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 FCGR1AP12314 374 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 CPB1P15086 417 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ARF4P18085 180 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 RABGGTBP53611 331 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SLC12A2P55011 1212 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SNX16P57768 344 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SH3BP2P78314 561 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 LIPEQ05469 1076 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ADIGQ0VDE8 80 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 CBX2Q14781 532 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 MAPRE1Q15691 268 aaKnown RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 UGP2Q16851 508 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 PAGE2BQ5JRK9 111 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 UTS2BQ765I0 119 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 LINC00523Q86TU6 105 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SLC2A14Q8TDB8 520 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 TMEM125Q96AQ2 219 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 BIRC7Q96CA5 298 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 CELF6Q96J87 481 aaKnown RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 TEX37Q96LM6 180 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 TEPSINQ96N21 525 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 CGREF1Q99674 301 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 KCTD14Q9BQ13 255 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 FDXACB1Q9BRP7 624 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SCHIP1Q9P0W5 487 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ANKMY1Q9P2S6 941 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SUN2Q9UH99 717 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 BAG5Q9UL15 447 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SNX10Q9Y5X0 201 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SCN1AP35498 2009 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 A0A087X1B8 175 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 BBIP1A8MTZ0 92 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 PTGES3LE9PB15 166 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 UGT2B11O75310 529 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ARIH2O95376 493 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 BMP4P12644 408 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 AGXTP21549 392 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 FSHRP23945 695 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 TKTP29401 623 aaKnown RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 CASP2P42575 452 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ARSFP54793 590 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 DMPKQ09013 629 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 INAQ16352 499 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 GEN1Q17RS7 908 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ANKRD34AQ69YU3 496 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 PLEKHG7Q6ZR37 379 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 HFE2Q6ZVN8 426 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SLC22A16Q86VW1 577 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 CNTN4Q8IWV2 1026 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 TBC1D21Q8IYX1 336 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 MIER2Q8N344 545 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 NDNFQ8TB73 568 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 EXT2Q93063 718 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 EFHD2Q96C19 240 aaPredicted RBP10.3□□□□□ -0.76
CLIP4-208ENST00000456385 KCNA7Q96RP8 456 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ATXN3LQ9H3M9 355 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ALG9Q9H6U8 611 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 VTA1Q9NP79 307 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 GMIPQ9P107 970 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 KLHL3Q9UH77 587 aa10.3□□□□□ -0.76
CLIP4-208ENST00000456385 ENPP5Q9UJA9 477 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms