RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 SMIM29Q86T20 159 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 ZNF354CQ86Y25 554 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 FOXRED2Q8IWF2 684 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 CHERPQ8IWX8 916 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 HUS1BQ8NHY5 278 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 KIF1BPQ96EK5 621 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 KLHL15Q96M94 604 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 TTC14Q96N46 770 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 LBHD1Q9BQE6 289 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 MMP28Q9H239 520 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 NDST4Q9H3R1 872 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 PLEKHA4Q9H4M7 779 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 VEZTQ9HBM0 779 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 TTC7AQ9ULT0 858 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 ERVK-11Q9UQG0 969 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 PSAT1Q9Y617 370 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 RPS6KL1Q9Y6S9 549 aa3.6□□□□□ -1.83
R3HDM1-212ENST00000456040 TAF1P21675 1872 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 A0A1W2PS18 150 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 FAM172BPA6NC97 362 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 HOXC11O43248 304 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SEC14L5O43304 696 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 ATP1A1P05023 1023 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 CYC1P08574 325 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 HOXB5P09067 269 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 CETPP11597 493 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 ANOS1P23352 680 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 ARL1P40616 181 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 TMPOP42166 694 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 PAFAH1B1P43034 410 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 GNAQP50148 359 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 FUT6P51993 359 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 HNRNPH2P55795 449 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 PHEXP78562 749 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SORDQ00796 357 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SLC20A2Q08357 652 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 RBBP5Q15291 538 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 C2orf68Q2NKX9 166 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 EIF2S3LQ2VIR3 472 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SLC9B1Q4ZJI4 515 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SLC45A4Q5BKX6 768 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 KCNT1Q5JUK3 1230 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 GGNBP1Q5YKI7 109 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 PLEKHA7Q6IQ23 1121 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 TRMT1LQ7Z2T5 733 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SPATA6LQ8N4H0 392 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 MYRIPQ8NFW9 859 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 KLHL29Q96CT2 875 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 CDCA5Q96FF9 252 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 FAM110AQ9BQ89 295 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SPRY4Q9C004 299 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 KCNN2Q9H2S1 579 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 LRRC4Q9HBW1 653 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 HINT3Q9NQE9 182 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 MAP3K20Q9NYL2 800 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 RRN3Q9NYV6 651 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 KCND2Q9NZV8 630 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 LUZP4Q9P127 313 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 SCINQ9Y6U3 715 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 UTYO14607 1347 aa3.59□□□□□ -1.83
R3HDM1-212ENST00000456040 PRR23AA6NEV1 266 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 USP17L23D6RBM5 183 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 C16orf97H3BN30 126 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 FGF17O60258 216 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 DDIT3P35638 169 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 GNL1P36915 607 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 USP8P40818 1118 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 MAPK9P45984 424 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 RELQ04864 619 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 NAE1Q13564 534 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 TRNP1Q6NT89 227 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 WDR63Q8IWG1 891 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 ODF3L1Q8IXM7 274 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 RNF113BQ8IZP6 322 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 CPXCR1Q8N123 301 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 METTL27Q8N6F8 245 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 GPATCH11Q8N954 259 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 OR13A1Q8NGR1 328 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 RNF125Q96EQ8 232 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 SLC41A2Q96JW4 573 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 PPP1R3EQ9H7J1 279 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 ABCF3Q9NUQ8 709 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 TMEM30AQ9NV96 361 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 GGA3Q9NZ52 723 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 SWAP70Q9UH65 585 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 AMDHD2Q9Y303 409 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 ZNF711Q9Y462 761 aa3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 PDS5AQ29RF7 1337 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-212ENST00000456040 ASPDHA6ND91 283 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 RRN3P2A6NIE6 340 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 LRRC53A6NM62 1247 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 P2RY10O00398 339 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 NCAM2O15394 837 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 CDH1P12830 882 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 XBP1P17861 261 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 S1PR1P21453 382 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 BDKRB2P30411 391 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 ABCD1P33897 745 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 PDE1BQ01064 536 aa3.57□□□□□ -1.84
R3HDM1-212ENST00000456040 NEXNQ0ZGT2 675 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms