RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HMGN1P05114 100 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 PRKCBP05771 671 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 GNAO1P09471 354 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 SLC7A1P30825 629 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 RPS7P62081 194 aaKnown RBP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 TRIM32Q13049 653 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 BIKQ13323 160 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 BEND5Q7L4P6 421 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 FAM228AQ86W67 206 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 CLP1Q92989 425 aaKnown RBP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 EXT2Q93063 718 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 MRIQ9BWK5 157 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 IRX2Q9BZI1 471 aaPredicted RBP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 ADAMTS10Q9H324 1103 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 ACTR3BQ9P1U1 418 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 KCNN3Q9UGI6 736 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 CACFD1Q9UGQ2 172 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 NAALADL1Q9UQQ1 740 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 TAF6LQ9Y6J9 622 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 HPRP00739 348 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 CD40LGP29965 261 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 SLC39A6Q13433 755 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF311Q5JNZ3 666 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 MSANTD1Q6ZTZ1 278 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 C4orf33Q8N1A6 199 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 C1orf54Q8WWF1 131 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 SERAC1Q96JX3 654 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 SLC4A9Q96Q91 983 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 EBNA1BP2Q99848 306 aaKnown RBP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 RAB11FIP5Q9BXF6 653 aa5.21□□□□□ -1.57
CSMD3-204ENST00000455883 ZCCHC17Q9NP64 241 aaKnown RBP5.21□□□□□ -1.57
CSMD3-204ENST00000455883 NUDT19A8MXV4 375 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF487B1APH4 448 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 WRBO00258 174 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 RPLP0P05388 317 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 FOSL1P15407 271 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SERPINA4P29622 427 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TAS2R31P59538 309 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GALNT13Q8IUC8 556 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TRIM48Q8IWZ4 208 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 REXO1L1PQ8IX06 675 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GALNT12Q8IXK2 581 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SP8Q8IXZ3 490 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 OFCC1Q8IZS5 231 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 WDSUB1Q8N9V3 476 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MFSD2AQ8NA29 543 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PNLDC1Q8NA58 520 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NKD2Q969F2 451 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CNDP2Q96KP4 475 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NSMCE3Q96MG7 304 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SPATA33Q96N06 139 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SIAEQ9HAT2 523 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CATSPERZQ9NTU4 200 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 DIP2BQ9P265 1576 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 hCG_2014768A0A024R1R8 64 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PPP1R3GB7ZBB8 358 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SCN2BO60939 215 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PSIP1O75475 530 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ATE1O95260 518 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 IFNA10P01566 189 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 IFNA4P05014 189 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 FAM163BP0C2L3 166 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MTHFD1P11586 935 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 KLRC1P26715 233 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TPTEP56180 551 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MOGQ16653 247 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SLC9A4Q6AI14 798 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 Q8N402 240 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 OR4C15Q8NGM1 316 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 UROC1Q96N76 676 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TLR10Q9BXR5 811 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 FOLH1BQ9HBA9 442 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM138Q9NPI0 162 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TLR8Q9NR97 1041 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ARL8BQ9NVJ2 186 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 AP4B1Q9Y6B7 739 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 A0A096LPK6 155 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CLIC2O15247 247 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 URODP06132 367 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ADRA1DP25100 572 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ASTE1Q2TB18 679 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GLRA4Q5JXX5 417 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 IQCKQ8N0W5 287 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 AGBL3Q8NEM8 1001 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 METTL6Q8TCB7 284 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TCP10LQ8TDR4 215 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CERS2Q96G23 380 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GRIP2Q9C0E4 1043 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SP140LQ9H930 580 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MARCOQ9UEW3 520 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NUP50Q9UKX7 468 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TRIM43BA6NCK2 446 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MSCO60682 206 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CCNB1P14635 433 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 BCAMP50895 628 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GPAT2Q6NUI2 795 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 C4orf19Q8IY42 314 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms