RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 COL5A1P20908 1838 aaPredicted RBP24.84■■□□□ 1.57
MSH2-203ENST00000454849 MAP1BP46821 2468 aaKnown RBP24.83■■□□□ 1.57
MSH2-203ENST00000454849 C1orf232A0A0U1RR37 186 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 YY2O15391 372 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 RASGRP1O95267 797 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 SLC4A1P02730 911 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 NFKB1P19838 968 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 STC1P52823 247 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 OTUD4Q01804 1114 aaKnown RBP24.83■■□□□ 1.57
MSH2-203ENST00000454849 CDKN3Q16667 212 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 UNQ6494/PRO21346Q6UXR6 183 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 OR56A4Q8NGH8 313 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 ACTL9Q8TC94 416 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 PTCD2Q8WV60 388 aaKnown RBP24.83■■□□□ 1.57
MSH2-203ENST00000454849 GATA6Q92908 595 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 QKIQ96PU8 341 aaKnown RBP eCLIP24.83■■□□□ 1.57
MSH2-203ENST00000454849 AGAP2Q99490 1192 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 MLPHQ9BV36 600 aaPredicted RBP24.83■■□□□ 1.57
MSH2-203ENST00000454849 CYP4F12Q9HCS2 524 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 SIRPGQ9P1W8 387 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 KLHL8Q9P2G9 620 aaPredicted RBP24.83■■□□□ 1.57
MSH2-203ENST00000454849 GUCA1BQ9UMX6 200 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 CSNK1G3Q9Y6M4 447 aa24.83■■□□□ 1.57
MSH2-203ENST00000454849 CPED1A4D0V7 1026 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 ANKRD66B4E2M5 251 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 PSMD11O00231 422 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 ANXA6P08133 673 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 RBL1P28749 1068 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 POLD2P49005 469 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 KIAA1024LP59773 190 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 COPS2P61201 443 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 RPL26P61254 145 aaKnown RBP24.82■■□□□ 1.56
MSH2-203ENST00000454849 DOK6Q6PKX4 331 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 CCNI2Q6ZMN8 369 aaPredicted RBP24.82■■□□□ 1.56
MSH2-203ENST00000454849 TMPRSS7Q7RTY8 843 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 PID1Q7Z2X4 250 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 TRIM74Q86UV6 250 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 ZNF567Q8N184 647 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 HTR3CQ8WXA8 447 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 AP2M1Q96CW1 435 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 TRIB3Q96RU7 358 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 RIOK2Q9BVS4 552 aaKnown RBP24.82■■□□□ 1.56
MSH2-203ENST00000454849 TMEM121BQ9BXQ6 578 aaPredicted RBP24.82■■□□□ 1.56
MSH2-203ENST00000454849 ADGRE3Q9BY15 652 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 RPL26L1Q9UNX3 145 aaKnown RBP24.82■■□□□ 1.56
MSH2-203ENST00000454849 DOLKQ9UPQ8 538 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 SHOC2Q9UQ13 582 aa24.82■■□□□ 1.56
MSH2-203ENST00000454849 APOC4-APOC2K7ER74 178 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 DDX3YO15523 660 aaKnown RBP24.81■■□□□ 1.56
MSH2-203ENST00000454849 TNFP01375 233 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 APOC2P02655 101 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 CKMT1AP12532 417 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 ACP1P24666 158 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 GPR1P46091 355 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 NOMO1Q15155 1222 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 LYSMD3Q7Z3D4 306 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 TXLNBQ8N3L3 684 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 DUSP23Q9BVJ7 150 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 PHPT1Q9NRX4 125 aaPredicted RBP24.81■■□□□ 1.56
MSH2-203ENST00000454849 GULP1Q9UBP9 304 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 TMEM98Q9Y2Y6 226 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 PCDHGA1Q9Y5H4 931 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 PTPRBP23467 1997 aa24.81■■□□□ 1.56
MSH2-203ENST00000454849 LMO7DNF2Z398 122 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 FUCA1P04066 466 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 BLKP51451 505 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 EIF3EP60228 445 aaKnown RBP24.8■■□□□ 1.56
MSH2-203ENST00000454849 CDK3Q00526 305 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 CDK18Q07002 472 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 SMAD1Q15797 465 aaKnown RBP24.8■■□□□ 1.56
MSH2-203ENST00000454849 SYCE1Q8N0S2 351 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 ATL2Q8NHH9 583 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 CCL4L1Q8NHW4 92 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 TADA1Q96BN2 335 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 TEX101Q9BY14 249 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 TMEM168Q9H0V1 697 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 PLXNB3Q9ULL4 1909 aa24.8■■□□□ 1.56
MSH2-203ENST00000454849 IGF2RP11717 2491 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 FAM221BA6H8Z2 402 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 INPP4BO15327 924 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 SOD1P00441 154 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 MYCLP1P12525 358 aaPredicted RBP24.79■■□□□ 1.56
MSH2-203ENST00000454849 ZNF30P17039 623 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 HES3Q5TGS1 186 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 ZCCHC8Q6NZY4 707 aaKnown RBP24.79■■□□□ 1.56
MSH2-203ENST00000454849 GUSBP11Q6P575 273 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 SFTPA2Q8IWL1 248 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 SLC35F3Q8IY50 421 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 SLC25A41Q8N5S1 370 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 UBL4BQ8N7F7 174 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 FAM181AQ8N9Y4 354 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 EID2BQ96D98 161 aa24.79■■□□□ 1.56
MSH2-203ENST00000454849 OXNAD1Q96HP4 312 aaPredicted RBP24.79■■□□□ 1.56
MSH2-203ENST00000454849 PRSS38A1L453 326 aa24.78■■□□□ 1.56
MSH2-203ENST00000454849 HACD1B0YJ81 288 aa24.78■■□□□ 1.56
MSH2-203ENST00000454849 CASC3O15234 703 aaKnown RBP24.78■■□□□ 1.56
MSH2-203ENST00000454849 MTSS1O43312 755 aa24.78■■□□□ 1.56
MSH2-203ENST00000454849 PTMAP06454 111 aaKnown RBP24.78■■□□□ 1.56
MSH2-203ENST00000454849 CEACAM5P06731 702 aa24.78■■□□□ 1.56
MSH2-203ENST00000454849 HOXC4P09017 264 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms