RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ZNF438Q7Z4V0 828 aa23.71■■□□□ 1.39
LYSMD2-202ENST00000454181 C17orf82Q86X59 251 aaPredicted RBP23.71■■□□□ 1.39
LYSMD2-202ENST00000454181 NRROSQ86YC3 692 aa23.71■■□□□ 1.39
LYSMD2-202ENST00000454181 CCDC74BQ96LY2 380 aa23.71■■□□□ 1.39
LYSMD2-202ENST00000454181 FRMD8Q9BZ67 464 aaPredicted RBP23.71■■□□□ 1.39
LYSMD2-202ENST00000454181 CWC15Q9P013 229 aaKnown RBP23.71■■□□□ 1.39
LYSMD2-202ENST00000454181 IGHV5-10-1A0A0J9YXX1 117 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 TMEM191CA6NGB0 347 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 LRRC10BA6NIK2 292 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 HTRA2O43464 458 aaPredicted RBP23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 ITGB6P18564 788 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 CD1CP29017 333 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 CSTF2P33240 577 aaKnown RBP eCLIP23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 ARL4AP40617 200 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 IRF2BP2Q7Z5L9 587 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 IL22RA1Q8N6P7 574 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 ARFGAP1Q8N6T3 406 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 AGBL5Q8NDL9 886 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 SPOCK2Q92563 424 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 DTD2Q96FN9 168 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 NUDCD1Q96RS6 583 aa23.7■■□□□ 1.38
LYSMD2-202ENST00000454181 SCN8AQ9UQD0 1980 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 PSMD11O00231 422 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 WT1P19544 449 aaPredicted RBP23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 LIMK2P53671 638 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 CTBSQ01459 385 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 NR1D2Q14995 579 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 DOK6Q6PKX4 331 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 TMCO3Q6UWJ1 677 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 ZNF574Q6ZN55 896 aaPredicted RBP23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 USP45Q70EL2 814 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 HSD11B1LQ7Z5J1 315 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 NDUFAF2Q8N183 169 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 FNIP1Q8TF40 1166 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 NSMCE3Q96MG7 304 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 DPYSL5Q9BPU6 564 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 CDH19Q9H159 772 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 NOD2Q9HC29 1040 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 MYO6Q9UM54 1294 aa23.69■■□□□ 1.38
LYSMD2-202ENST00000454181 HECTD1Q9ULT8 2610 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 SUV39H1O43463 412 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 FUCA1P04066 466 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 ADCY8P40145 1251 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 ACTR1BP42025 376 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 GPR1P46091 355 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 POLD2P49005 469 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 ACTR1AP61163 376 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 DPYSQ14117 519 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 NKAIN2Q5VXU1 208 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 Q6ZVL8 140 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 TP53INP2Q8IXH6 220 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 OR4D9Q8NGE8 314 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 PATE1Q8WXA2 126 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 SLC25A18Q9H1K4 315 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 GEMIN8Q9NWZ8 242 aaKnown RBP23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 KCNK4Q9NYG8 393 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 CNOT8Q9UFF9 292 aaKnown RBP23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 SLC17A4Q9Y2C5 497 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 PCDHGA3Q9Y5H0 932 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 SCINQ9Y6U3 715 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 MAST4O15021 2626 aa23.68■■□□□ 1.38
LYSMD2-202ENST00000454181 TERTO14746 1132 aaKnown RBP23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 FTLP02792 175 aaPredicted RBP23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 IVLP07476 585 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 FGF3P11487 239 aaPredicted RBP23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ATP1A3P13637 1013 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 TEAD1P28347 426 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ASIC2Q16515 512 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 STX1AQ16623 288 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 RALGPS1Q5JS13 557 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ARMC12Q5T9G4 340 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 MARC1Q5VT66 337 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 NAGSQ8N159 534 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ATPAF2Q8N5M1 289 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ART4Q93070 314 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 NKD1Q969G9 470 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 SCRN2Q96FV2 425 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 AHCYL2Q96HN2 611 aaKnown RBP23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ASPSCR1Q9BZE9 553 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 LMBRD1Q9NUN5 540 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 SLC39A1Q9NY26 324 aa23.67■■□□□ 1.38
LYSMD2-202ENST00000454181 ARHGEF17Q96PE2 2063 aaPredicted RBP23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 NPIPB15A6NHN6 443 aaPredicted RBP23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 LRCH4O75427 683 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 CR2P20023 1033 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 AMPD1P23109 780 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 BORAQ6PGQ7 559 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 FAM129CQ86XR2 697 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 HTR3CQ8WXA8 447 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 ZNF653Q96CK0 615 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 OR2M4Q96R27 311 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 MGME1Q9BQP7 344 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 SYT11Q9BT88 431 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 TRIM7Q9C029 511 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 ADNPQ9H2P0 1102 aa23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 MRPL47Q9HD33 250 aaKnown RBP23.66■■□□□ 1.38
LYSMD2-202ENST00000454181 TLN1Q9Y490 2541 aaKnown RBP23.65■■□□□ 1.38
LYSMD2-202ENST00000454181 IGHV1OR21-1A0A087WYE8 117 aa23.65■■□□□ 1.38
LYSMD2-202ENST00000454181 PPM1DO15297 605 aa23.65■■□□□ 1.38
LYSMD2-202ENST00000454181 PGLSO95336 258 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms