RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 OR52E6Q96RD3 313 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 MLPHQ9BV36 600 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 C2orf49Q9BVC5 232 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 GLOD4Q9HC38 313 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ADGRE2Q9UHX3 823 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 SSR3Q9UNL2 185 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 PDE4DIPQ5VU43 2346 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 KIF1AQ12756 1690 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 FFAR3O14843 346 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 GPR42O15529 346 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 RPL26P61254 145 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 CSNK2BP67870 215 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 PTSQ03393 145 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 GBE1Q04446 702 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ACOX1Q15067 660 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 LSM12Q3MHD2 195 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 PPM1JQ5JR12 505 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 LRRC17Q8N6Y2 441 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 C12orf29Q8N999 325 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 MBD2Q9UBB5 411 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 RFXANKO14593 260 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 H6PDO95479 791 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 CLK2P49760 499 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ATP12AP54707 1039 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 CCNYL2Q5T2Q4 361 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 HLA-DQA1Q5Y7H0 255 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 SH3BP5LQ7L8J4 393 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF671Q8TAW3 534 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 HM13Q8TCT9 377 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 UBE2E3Q969T4 207 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ASB8Q9H765 288 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 SLIT3O75094 1523 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ADRA1BP35368 520 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ATP5C1P36542 298 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 CDK18Q07002 472 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 PYDC2Q56P42 97 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 AHI1Q8N157 1196 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 OR4L1Q8NH43 312 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 PPP1R14AQ96A00 147 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 GIN1Q9NXP7 522 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 A0A088AWK7 358 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PMM2O15305 246 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 AP2A1O95782 977 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF10P21506 573 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 SRP54P61011 504 aaKnown RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 DLG2Q15700 870 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PPP1R13LQ8WUF5 828 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PANX1Q96RD7 426 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 DUSP16Q9BY84 665 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 RMI1Q9H9A7 625 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ING3Q9NXR8 418 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PLK2Q9NYY3 685 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 TDRKHQ9Y2W6 561 aaKnown RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 LOC110117498-PIK3R3F6TDL0 507 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 RGS10O43665 173 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 NDUFB5O43674 189 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 CILPO75339 1184 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 CCNKO75909 580 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PAX3P23760 479 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ANO7Q6IWH7 933 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 USP45Q70EL2 814 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 FAM84AQ96KN4 292 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ADI1Q9BV57 179 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 CRISPLD1Q9H336 500 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 FAM124BQ9H5Z6 455 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 IFT80Q9P2H3 777 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 KPNA5O15131 536 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 NR2F6P10588 404 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PRKAR1AP10644 381 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 LPOP22079 712 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 CAPGP40121 348 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 GRM5P41594 1212 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 MAPK8P45983 427 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 REP15Q6BDI9 236 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 RD3Q7Z3Z2 195 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF781Q8N8C0 355 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 LRTOMTQ8WZ04 291 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 TSPAN18Q96SJ8 248 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 C1QTNF7Q9BXJ2 289 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 COQ4Q9Y3A0 265 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PLK4O00444 970 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 SUV39H1O43463 412 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 TULP3O75386 442 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 MTHFRP42898 656 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PRKD1Q15139 912 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-207ENST00000453963 PPM1LQ5SGD2 360 aa12.03□□□□□ -0.48
SEC16A-207ENST00000453963 ARMC8Q8IUR7 673 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms