RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 HUS1O60921 280 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 CD70P32970 193 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PBX1P40424 430 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PEX3P56589 373 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PFN3P60673 137 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 GPR85P60893 370 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 LSAMPQ13449 338 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 TRA2AQ13595 282 aaKnown RBP eCLIP5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PCOLCEQ15113 449 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 CLPPQ16740 277 aaPredicted RBP5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PRSS53Q2L4Q9 553 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 KRTAP24-1Q3LI83 254 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PIP5KL1Q5T9C9 394 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 DENND5AQ6IQ26 1287 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 MEX3BQ6ZN04 569 aaKnown RBP5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 Q6ZS92 163 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 KDELC2Q7Z4H8 507 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 HORMAD1Q86X24 394 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 CPNE8Q86YQ8 564 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 TMEM161BQ8NDZ6 487 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PCDH19Q8TAB3 1148 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 WFDC5Q8TCV5 224 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 FAR1Q8WVX9 515 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 THAP4Q8WY91 577 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 RILPL2Q969X0 211 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 CTRCQ99895 268 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 SYT15Q9BQS2 421 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNF518BQ9C0D4 1074 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 SP110Q9HB58 689 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 FBXO8Q9NRD0 319 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 AGPAT4Q9NRZ5 378 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 FANCLQ9NW38 375 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 VPS54Q9P1Q0 977 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 APOBEC3BQ9UH17 382 aaKnown RBP5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 GPR160Q9UJ42 338 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 GGA2Q9UJY4 613 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 CDH9Q9ULB4 789 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNF510Q9Y2H8 683 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 TRPM6Q9BX84 2022 aa5.33□□□□□ -1.56
SBDSP1-204ENST00000453858 SEC16AO15027 2179 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 H7BY64 318 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 PHF1O43189 567 aaPredicted RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 MED24O75448 989 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 IL1BP01584 269 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 GLI1P08151 1106 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 PDGFRBP09619 1106 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 SPAM1P38567 509 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 MAPK7Q13164 816 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 PDE1CQ14123 709 aaPredicted RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 HLTFQ14527 1009 aaKnown RBP eCLIP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 MAPRE1Q15691 268 aaKnown RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 NTRK3Q16288 839 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ASIC2Q16515 512 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 KYAT1Q16773 422 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 UGT8Q16880 541 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 EDRF1Q3B7T1 1238 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 SEL1L3Q68CR1 1132 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNF324BQ6AW86 544 aaPredicted RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 PODNL1Q6PEZ8 512 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 BHLHB9Q6PI77 547 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 PAQR9Q6ZVX9 377 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 PTAR1Q7Z6K3 402 aaPredicted RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 SFR1Q86XK3 245 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 LZTR1Q8N653 840 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ESX1Q8N693 406 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 CCDC112Q8NEF3 446 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 NUP43Q8NFH3 380 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ADAMTS18Q8TE60 1221 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 GRHL3Q8TE85 626 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 DDI1Q8WTU0 396 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 CCDC43Q96MW1 224 aaKnown RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ZPBPQ9BS86 351 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 B3GNT5Q9BYG0 378 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 NACA2Q9H009 215 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ASB7Q9H672 318 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 NMUR1Q9HB89 426 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 NCOA5Q9HCD5 579 aaKnown RBP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 APMAPQ9HDC9 416 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 COMMD8Q9NX08 183 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 FAM53CQ9NYF3 392 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 C5AR2Q9P296 337 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 LRIT1Q9P2V4 623 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNHIT2Q9UHR6 403 aa5.32□□□□□ -1.56
SBDSP1-204ENST00000453858 EDDM13A0A1B0GTR0 161 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 ARGFXA6NJG6 315 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 CLDN5O00501 218 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 OGTO15294 1046 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 ZBTB43O43298 467 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 NUDT21O43809 227 aaKnown RBP5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 PSPNO60542 156 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 CLDN14O95500 239 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 ASMTLO95671 621 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 PAK4O96013 591 aaPredicted RBP5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 THRAP10827 490 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 GCFC2P16383 781 aaKnown RBP5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 ZNF28P17035 718 aa5.31□□□□□ -1.56
SBDSP1-204ENST00000453858 PRKCAP17252 672 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 307.2 ms