RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KLKB1P03952 638 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ENO1P06733 434 aaKnown RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 GM2AP17900 193 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 AOC1P19801 751 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 LEPRP48357 1165 aaKnown RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 SLC11A2P49281 568 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 CDH4P55283 916 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 POU4F1Q01851 419 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 GNA12Q03113 381 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 USP4Q13107 963 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ZNF235Q14590 738 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ZNF789Q5FWF6 425 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 WASHC2DQ5SRD0 308 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 WLSQ5T9L3 541 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 LIPMQ5VYY2 423 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 CNSTQ6PJW8 725 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 UBALD2Q8IYN6 164 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 FSTL5Q8N475 847 aaPredicted RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 ZNF781Q8N8C0 355 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 OMDQ99983 421 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 CDH19Q9H159 772 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 BRD9Q9H8M2 597 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 PRR5-ARHGAP8B1AHC4 643 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 PEX11AO75192 247 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 STC2O76061 302 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 GLRBP48167 497 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 ARSDP51689 593 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 CLCN5P51795 746 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 ARHGAP8P85298 464 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 ACVR1Q04771 509 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 UBAP2LQ14157 1087 aaKnown RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 RBM20Q5T481 1227 aaKnown RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 TRIM68Q6AZZ1 485 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 DENND1CQ8IV53 801 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 YAF2Q8IY57 180 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 TEX9Q8N6V9 391 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 GPATCH11Q8N954 259 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 OR7D4Q8NG98 312 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 NXNL1Q96CM4 212 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 SCYL1Q96KG9 808 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 MGME1Q9BQP7 344 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 DRC3Q9H069 523 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 CFAP97Q9P2B7 532 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 XPR1Q9UBH6 696 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 TAGLN3Q9UI15 199 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 APOBEC2Q9Y235 224 aaKnown RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 ARNTLO00327 626 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 EPOP01588 193 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 FGF1P05230 155 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 IRF1P10914 325 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 HLA-DPA1P20036 260 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 SGSHP51688 502 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 RPS24P62847 133 aaKnown RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 E2F5Q15329 346 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 SLC14A2Q15849 920 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 TSNAXIP1Q2TAA8 658 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 CILP2Q8IUL8 1156 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 TRIB3Q96RU7 358 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 OLFM1Q99784 485 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 MMADHCQ9H3L0 296 aaPredicted RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 DENND2DQ9H6A0 471 aaPredicted RBP10.73□□□□□ -0.69
PKP4-206ENST00000452162 IGSF5Q9NSI5 407 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 CA14Q9ULX7 337 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 L3MBTL1Q9Y468 752 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 ACTL7AQ9Y615 435 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 WNT6Q9Y6F9 365 aa10.73□□□□□ -0.69
PKP4-206ENST00000452162 B2RBV5 119 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 KDELR3O43731 214 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 DLX3O60479 287 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 CLDN11O75508 207 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 TCF3P15923 654 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 CORO1AP31146 461 aaKnown RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 CPA2P48052 419 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 GRIA4P48058 902 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 NUMBP49757 651 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 SIGLEC14Q08ET2 396 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 RCN2Q14257 317 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 VWA5B1Q5TIE3 1220 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 EPGNQ6UW88 154 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 CHST9Q7L1S5 443 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 FBXO27Q8NI29 283 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 GABPB2Q8TAK5 448 aaPredicted RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 TTC8Q8TAM2 541 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 IRF7Q92985 503 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 HDAC10Q969S8 669 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 IFT43Q96FT9 208 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 NDNQ99608 321 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 FAM83CQ9BQN1 747 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 LINC00597Q9H2U6 94 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.72□□□□□ -0.692e-6■■■■■ 32.6
PKP4-206ENST00000452162 GTSE1Q9NYZ3 720 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 MARCH4Q9P2E8 410 aaPredicted RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 SEPT3Q9UH03 358 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 KCTD3Q9Y597 815 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 ATG2BQ96BY7 2078 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms