RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 UXTQ9UBK9 157 aaPredicted RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 RNF103-CHMP3A0A140T963 221 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 TCRBV3S1A0A5B6 114 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 RECQLP46063 649 aaPredicted RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 NDST2P52849 883 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 SH3BP2P78314 561 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 TMED1Q13445 227 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CIR1Q86X95 450 aaPredicted RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 PSMG2Q969U7 264 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 RANBP9Q96S59 729 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 SLC25A51Q9H1U9 297 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 GALNT8Q9NY28 637 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 HSFX1Q9UBD0 423 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CNTN5O94779 1100 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 ITGB1P05556 798 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 GNAO1P09471 354 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 SPRYD7Q5W111 196 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CYHR1Q6ZMK1 362 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 ISCA2Q86U28 154 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CARM1Q86X55 608 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 PNPLA3Q9NST1 481 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CNOT11Q9UKZ1 510 aaKnown RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 TMCO1Q9UM00 188 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 UBA6A0AVT1 1052 aaPredicted RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 NME4O00746 187 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CAPN15O75808 1086 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CLIC3O95833 236 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 ALDH7A1P49419 539 aaKnown RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 GALK1P51570 392 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 HPCAP84074 193 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 FUT11Q495W5 492 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 LARP4Q71RC2 724 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■■□□ 14.7
SYVN1-204ENST00000449943 TWIST2Q8WVJ9 160 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 SKA2Q8WVK7 121 aaPredicted RBP11.32□□□□□ -0.6
SYVN1-204ENST00000449943 CYGBQ8WWM9 190 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 ACBD6Q9BR61 282 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 PIF1Q9H611 641 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 DNAJC15Q9Y5T4 150 aa11.32□□□□□ -0.6
SYVN1-204ENST00000449943 NCF1BA6NI72 391 aaPredicted RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 NCF1CA8MVU1 366 aaPredicted RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 PRSS56P0CW18 603 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 CDK4P11802 303 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 NCF1P14598 390 aaPredicted RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 RENBPP51606 427 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 YBX1P67809 324 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 GALNT3Q14435 633 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 SIRPB2Q5JXA9 342 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 PIK3R6Q5UE93 754 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 SCD5Q86SK9 330 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 STON2Q8WXE9 905 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 TOP1MTQ969P6 601 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 UBXN10Q96LJ8 280 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 MTIF3Q9H2K0 278 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ARL5AQ9Y689 179 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 H3BNH8 94 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 S1PR4O95977 384 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 IGLV3-25P01717 112 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 MT-ND1P03886 318 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ZNF23P17027 643 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ELAVL2Q12926 359 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ALFQ53S48 1182 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 RNF219Q5W0B1 726 aaPredicted RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 FAM45BPQ6NSW5 357 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 SCIMPQ6UWF3 145 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 KLHDC8BQ8IXV7 354 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 FIBCD1Q8N539 461 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 FAM45AQ8TCE6 357 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 TCF12Q99081 682 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 DHRS12A0PJE2 317 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 H7C4K7 107 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 HAS3O00219 553 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 CAPN3P20807 821 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 GPX3P22352 226 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 CES1P23141 567 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 HERVK_113P63132 956 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 IHHQ14623 411 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ADRM1Q16186 407 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 MIB1Q86YT6 1006 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 CLYBLQ8N0X4 340 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 MIER2Q8N344 545 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms