RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LRP4O75096 1905 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 ANKRD11Q6UB99 2663 aaPredicted RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 ZNF487B1APH4 448 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 KCNK1O00180 336 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 SPOPO43791 374 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 JCHAINP01591 159 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 TEAD1P28347 426 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 NOP2P46087 812 aaKnown RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 LSSP48449 732 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 CDK3Q00526 305 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 PPIDQ08752 370 aaKnown RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 AP1B1Q10567 949 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 C3orf38Q5JPI3 329 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 LRRC38Q5VT99 294 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 SARM1Q6SZW1 724 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 RFX6Q8HWS3 928 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 LPCAT1Q8NF37 534 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 SNIP1Q8TAD8 396 aaKnown RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 ARRDC2Q8TBH0 407 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 CCDC74AQ96AQ1 378 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 AP2M1Q96CW1 435 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 ZNF578Q96N58 590 aaPredicted RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 LGMNQ99538 433 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 GSDMCQ9BYG8 508 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 PCDH9Q9HC56 1237 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 DDX56Q9NY93 547 aaKnown RBP15.25■□□□□ 0.03
CHD3-205ENST00000449744 CD84Q9UIB8 345 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 SPEGQ15772 3267 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 ASPMQ8IZT6 3477 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 DMXL2Q8TDJ6 3036 aa15.25■□□□□ 0.03
CHD3-205ENST00000449744 A0A0U1RQS6 177 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 CAPN8A6NHC0 703 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 B4DGG1 531 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 PPP1R12AO14974 1030 aaPredicted RBP15.24■□□□□ 0.03
CHD3-205ENST00000449744 PYGLP06737 847 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 RBMS1P29558 406 aaKnown RBP15.24■□□□□ 0.03
CHD3-205ENST00000449744 MAGEA1P43355 309 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 GNPDA1P46926 289 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 RPL26P61254 145 aaKnown RBP15.24■□□□□ 0.03
CHD3-205ENST00000449744 DPTQ07507 201 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 NIPAL4Q0D2K0 466 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHD3-205ENST00000449744 PDK1Q15118 436 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 SLC9A4Q6AI14 798 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 TECPR1Q7Z6L1 1165 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 PLD5Q8N7P1 536 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 GPR156Q8NFN8 814 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 CCL4L1Q8NHW4 92 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 KIAA1524Q8TCG1 905 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 ATXN7L3BQ96GX2 97 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 SMIM14Q96QK8 99 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 GFM1Q96RP9 751 aaKnown RBP15.24■□□□□ 0.03
CHD3-205ENST00000449744 ABCG8Q9H221 673 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 RPL26L1Q9UNX3 145 aaKnown RBP15.24■□□□□ 0.03
CHD3-205ENST00000449744 SATB2Q9UPW6 733 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 ENTPD2Q9Y5L3 495 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 ASXL3Q9C0F0 2248 aa15.24■□□□□ 0.03
CHD3-205ENST00000449744 C3orf70A6NLC5 250 aaPredicted RBP15.23■□□□□ 0.03
CHD3-205ENST00000449744 RPLP0P05388 317 aaKnown RBP15.23■□□□□ 0.03
CHD3-205ENST00000449744 CEACAM5P06731 702 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 GLB1P16278 677 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 COMTP21964 271 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 CD86P42081 329 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 PCBP4P57723 403 aaKnown RBP15.23■□□□□ 0.03
CHD3-205ENST00000449744 DYNLT1P63172 113 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 IFI35P80217 286 aaPredicted RBP15.23■□□□□ 0.03
CHD3-205ENST00000449744 PTSQ03393 145 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 ZBTB17Q13105 803 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 TCEAL1Q15170 157 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 C14orf28Q4W4Y0 310 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 OGFOD3Q6PK18 319 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 DOK6Q6PKX4 331 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 ZNF765Q7L2R6 523 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 ZNF248Q8NDW4 579 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 ADGRE3Q9BY15 652 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 FRMD8Q9BZ67 464 aaPredicted RBP15.23■□□□□ 0.03
CHD3-205ENST00000449744 THSD1Q9NS62 852 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 TRNAU1APQ9NX07 287 aaKnown RBP15.23■□□□□ 0.03
CHD3-205ENST00000449744 SEPT10Q9P0V9 454 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 SUFUQ9UMX1 484 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 HYOU1Q9Y4L1 999 aa15.23■□□□□ 0.03
CHD3-205ENST00000449744 NTN3O00634 580 aaPredicted RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 NOBOXO60393 691 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 DXOO77932 396 aaKnown RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 CLDN7O95471 211 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 PRLP01236 227 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 ITPKBP27987 946 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 STC1P52823 247 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 ERVPABLB-1P60509 514 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 CCL7P80098 99 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 SKOR1P84550 965 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 CCDC173Q0VFZ6 552 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 BIRC2Q13490 618 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 PEX6Q13608 980 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 IHHQ14623 411 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 SPA17Q15506 151 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms