RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 CHRNA4P43681 627 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 EIF2B5Q13144 721 aaKnown RBP15.69■□□□□ 0.1
TOP3B-211ENST00000449704 NFATC4Q14934 902 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 CDKN3Q16667 212 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 INAVAQ3KP66 663 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 SIRPB2Q5JXA9 342 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 RAET1GQ6H3X3 334 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
TOP3B-211ENST00000449704 ENPP7Q6UWV6 458 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 MACC1Q6ZN28 852 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 DBX2Q6ZNG2 339 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 TAB3Q8N5C8 712 aaPredicted RBP15.69■□□□□ 0.1
TOP3B-211ENST00000449704 SCAMP4Q969E2 229 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 GORASP1Q9BQQ3 440 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 GPR63Q9BZJ6 419 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 ABCG8Q9H221 673 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 WDR26Q9H7D7 661 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 ZFYVE1Q9HBF4 777 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 MAGEE1Q9HCI5 957 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 KLF15Q9UIH9 416 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 AAR2Q9Y312 384 aaKnown RBP15.69■□□□□ 0.1
TOP3B-211ENST00000449704 ZNF711Q9Y462 761 aa15.69■□□□□ 0.1
TOP3B-211ENST00000449704 PIAS2O75928 621 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 CSF2P04141 144 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 ATXN1LP0C7T5 689 aaKnown RBP15.68■□□□□ 0.1
TOP3B-211ENST00000449704 CEACAM1P13688 526 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 TSHRP16473 764 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 JUNDP17535 347 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 HLA-DPA1P20036 260 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 DGKAP23743 735 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 TRIM23P36406 574 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 GPR1P46091 355 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 HNRNPKP61978 463 aaKnown RBP eCLIP15.68■□□□□ 0.12e-8■■■■■ 33.6
TOP3B-211ENST00000449704 SIX1Q15475 284 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-211ENST00000449704 OASLQ15646 514 aaKnown RBP15.68■□□□□ 0.1
TOP3B-211ENST00000449704 SLC1A5Q15758 541 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 CCNG2Q16589 344 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 PARP6Q2NL67 630 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 FAXCQ5TGI0 409 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 RD3Q7Z3Z2 195 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 NRSN1Q8IZ57 195 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 EID2Q8N6I1 236 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 ATL2Q8NHH9 583 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 FUBP1Q96AE4 644 aaKnown RBP15.68■□□□□ 0.1
TOP3B-211ENST00000449704 PBKQ96KB5 322 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 PPP1R2P1Q96PQ5 205 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 APOL2Q9BQE5 337 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 RIOK2Q9BVS4 552 aaKnown RBP15.68■□□□□ 0.1
TOP3B-211ENST00000449704 UCKL1Q9NWZ5 548 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 PKD2L2Q9NZM6 624 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 KLQ9UEF7 1012 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 PCOLCE2Q9UKZ9 415 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 SPO11Q9Y5K1 396 aa15.68■□□□□ 0.1
TOP3B-211ENST00000449704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
TOP3B-211ENST00000449704 DCHS1Q96JQ0 3298 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 SPAARA0A1B0GVQ0 90 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 H3BM21 787 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 METTL18O95568 372 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 NME1P15531 152 aaKnown RBP15.67■□□□□ 0.1
TOP3B-211ENST00000449704 ACTN2P35609 894 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 SPINT3P49223 89 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 KIAA1024LP59773 190 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 GNG11P61952 73 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 PPARDQ03181 441 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 DPTQ07507 201 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 OLIG2Q13516 323 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 SPARCL1Q14515 664 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 TRIP6Q15654 476 aaKnown RBP15.67■□□□□ 0.1
TOP3B-211ENST00000449704 ZNF765Q7L2R6 523 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 TMC3Q7Z5M5 1100 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 HEATR4Q86WZ0 1026 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 HID1Q8IV36 788 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 PHACTR4Q8IZ21 702 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 RBFAQ8N0V3 343 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 BLOC1S5Q8TDH9 187 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 TSACCQ96A04 125 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-211ENST00000449704 MS4A14Q96JA4 679 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 WDR92Q96MX6 357 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 SRPK1Q96SB4 655 aaKnown RBP15.67■□□□□ 0.1
TOP3B-211ENST00000449704 LGR4Q9BXB1 951 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 SLC13A1Q9BZW2 595 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 TCEAL2Q9H3H9 227 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-211ENST00000449704 FAM83DQ9H4H8 585 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 PHPT1Q9NRX4 125 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-211ENST00000449704 MOSPD1Q9UJG1 213 aa15.67■□□□□ 0.1
TOP3B-211ENST00000449704 ANKRD36A6QL64 1941 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 TMEM202A6NGA9 273 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 PDE2AO00408 941 aaPredicted RBP15.66■□□□□ 0.1
TOP3B-211ENST00000449704 AURKAO14965 403 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 SCAMP1O15126 338 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 FFAR2O15552 330 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 CBFA2T3O75081 653 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 FGF1P05230 155 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 KELP23276 732 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 SRP54P61011 504 aaKnown RBP15.66■□□□□ 0.1
TOP3B-211ENST00000449704 SIM1P81133 766 aaPredicted RBP15.66■□□□□ 0.1
TOP3B-211ENST00000449704 ALG11Q2TAA5 492 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 ALS2CLQ60I27 953 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 KANSL1Q7Z3B3 1105 aa15.66■□□□□ 0.1
TOP3B-211ENST00000449704 PRUNE1Q86TP1 453 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms