RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 HDAC11Q96DB2 347 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 NUDT9Q9BW91 350 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 LHX9Q9NQ69 397 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 MAPK8IP1Q9UQF2 711 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 MFHAS1Q9Y4C4 1052 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 ST14Q9Y5Y6 855 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 A6NL46 340 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 I6L893 689 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 ZNF185O15231 689 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 IGSF6O95976 241 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 CEACAM5P06731 702 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 MYCLP1P12525 358 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 COX6B1P14854 86 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 BPIP17213 487 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 CAPN3P20807 821 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 ERCC5P28715 1186 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 PTPN4P29074 926 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 ACTR1BP42025 376 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 ACTR1AP61163 376 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 RPS15P62841 145 aaKnown RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 DCAF17Q5H9S7 520 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 SYVN1Q86TM6 617 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 FMR1NBQ8N0W7 255 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 ELMO2Q96JJ3 720 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 NT5C1BQ96P26 610 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 OR6C1Q96RD1 312 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 BARD1Q99728 777 aaKnown RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 GTPBP4Q9BZE4 634 aaKnown RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 CHST11Q9NPF2 352 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 AGPAT4Q9NRZ5 378 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 KLF2Q9Y5W3 355 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 DOCK4Q8N1I0 1966 aa12.54□□□□□ -0.4
AC004540.1-204ENST00000449537 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 MED7O43513 233 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 SPAG6O75602 509 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 FAM155BO75949 473 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 PLEKP08567 350 aaPredicted RBP12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 ADCY8P40145 1251 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 PTGIRP43119 386 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 MAPK9P45984 424 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 NDUFA8P51970 172 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 UBE2Q2Q8WVN8 375 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 KAT5Q92993 513 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 SMAD5Q99717 465 aaKnown RBP12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 PHPT1Q9NRX4 125 aaPredicted RBP12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 GPR83Q9NYM4 423 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 C5AR2Q9P296 337 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
AC004540.1-204ENST00000449537 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 RASA4BC9J798 803 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 CETN3O15182 167 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 INSIG1O15503 277 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 RASA4O43374 803 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 BUB1O43683 1085 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 PRICKLE3O43900 615 aaPredicted RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF202O95125 648 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 F9P00740 461 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 CD1EP15812 388 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 LPOP22079 712 aaPredicted RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 HNRNPH3P31942 346 aaKnown RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 MMP12P39900 470 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 GLRBP48167 497 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 RPS18P62269 152 aaKnown RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 PDCLQ13371 301 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 MEA1Q16626 185 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 CRB2Q5IJ48 1285 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 ARTNQ5T4W7 220 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 CDH24Q86UP0 819 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 SLC37A2Q8TED4 501 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 SH3KBP1Q96B97 665 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 ILKAPQ9H0C8 392 aaPredicted RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 METTL14Q9HCE5 456 aaKnown RBP12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 PLEKHM1Q9Y4G2 1056 aa12.52□□□□□ -0.41
AC004540.1-204ENST00000449537 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 F5H423 210 aaPredicted RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 THAP12O43422 761 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms