RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 SATB2Q9UPW6 733 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ITM2BQ9Y287 266 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 HEY1Q9Y5J3 304 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 ENTPD2Q9Y5L3 495 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
PDLIM2-213ENST00000448520 GCN1Q92616 2671 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 TMX2-CTNND1H3BSU7 103 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 KIF2AO00139 706 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 MUSKO15146 869 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ALPIP09923 528 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 HTR1BP28222 390 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 HTR7P34969 479 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 IGFALSP35858 605 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ZNF135P52742 658 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 CFHR1Q03591 330 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 VAC14Q08AM6 782 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 C1orf61Q13536 156 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 LRRC14Q15048 493 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 PAFAH1B3Q15102 231 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ELOCQ15369 112 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 SIX1Q15475 284 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 LONRF2Q1L5Z9 754 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 C3orf38Q5JPI3 329 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 LEKR1Q6ZMV7 388 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ARHGAP36Q6ZRI8 547 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 VSIG1Q86XK7 387 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 CREG2Q8IUH2 290 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 SLC35F3Q8IY50 421 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ZNF843Q8N446 348 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ATL2Q8NHH9 583 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 WDR36Q8NI36 951 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 HMCESQ96FZ2 354 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 ATXN7L3BQ96GX2 97 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 C10orf88Q9H8K7 445 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 AHCTF1Q8WYP5 2266 aa13.81□□□□□ -0.2
PDLIM2-213ENST00000448520 RASA4BC9J798 803 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 DFFAO00273 331 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 RASA4O43374 803 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 CTSEP14091 401 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 TSHRP16473 764 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 CETN2P41208 172 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 HK3P52790 923 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 SKOR1P84550 965 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 SERINC3Q13530 473 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 SPIDRQ14159 915 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 TFDP2Q14188 446 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 PERM1Q5SV97 790 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 ARHGAP40Q5TG30 622 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 CCDC181Q5TID7 509 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 AFMIDQ63HM1 303 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 RBFAQ8N0V3 343 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 OR6C4Q8NGE1 309 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 ACTL9Q8TC94 416 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 UBE2Q2Q8WVN8 375 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 PRR11Q96HE9 360 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 ZNF641Q96N77 438 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 LRRC61Q9BV99 259 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 AP1M1Q9BXS5 423 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 CLPBQ9H078 707 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 TCEAL2Q9H3H9 227 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 SUV39H2Q9H5I1 410 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 LRRC19Q9H756 370 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 MBNL1Q9NR56 388 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 DTLQ9NZJ0 730 aa13.8□□□□□ -0.2
PDLIM2-213ENST00000448520 CCDC187A0A096LP49 1063 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 CFAP69A5D8W1 941 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 CDRT15L2A8MXV6 281 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 NTN3O00634 580 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 TJP3O95049 919 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 RASGRP1O95267 797 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 PAPOLAP51003 745 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 OTUD4Q01804 1114 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 SNX1Q13596 522 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 AGERQ15109 404 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 CYTH1Q15438 398 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 UGP2Q16851 508 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 ERAP2Q6P179 960 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 PCSK4Q6UW60 755 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 ENPP7Q6UWV6 458 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 GKN2Q86XP6 184 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 ARL10Q8N8L6 244 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 C1orf54Q8WWF1 131 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 WRAP53Q9BUR4 548 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 APOOQ9BUR5 198 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 CPNE5Q9HCH3 593 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 GULP1Q9UBP9 304 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 EFR3BQ9Y2G0 817 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 KALRNO60229 2985 aa13.79□□□□□ -0.2
PDLIM2-213ENST00000448520 A0A1W2PNU3 283 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 TSPAN11A1L157 253 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms