RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SHOC2Q9UQ13 582 aa7.55□□□□□ -1.2
AC004540.1-206ENST00000448056 ZNF711Q9Y462 761 aa7.55□□□□□ -1.2
AC004540.1-206ENST00000448056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 RGSL1A5PLK6 1076 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 MROH6A6NGR9 719 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 SDR42E2A6NKP2 422 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 C2orf81A6NN90 581 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 PSMD11O00231 422 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 NDC80O14777 642 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 WNT9AO14904 365 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LATO43561 262 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LDB2O43679 373 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LZTS3O60299 673 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 TM7SF2O76062 418 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 FSBPO95073 299 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 CRTAMO95727 393 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 PAK4O96013 591 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 IGHV4-34P06331 123 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 RHOXF2BP0C7M4 288 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 ELFN1P0C7U0 828 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 C6P13671 934 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 GM2AP17900 193 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 ADRA1DP25100 572 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 MAT2AP31153 395 aaKnown RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 HMGCLP35914 325 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 MAGEA3P43357 314 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 STC1P52823 247 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 PLTPP55058 493 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 SESN2P58004 480 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 PPP2CBP62714 309 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 PPP2CAP67775 309 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 CAV1Q03135 178 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 VAC14Q08AM6 782 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 TCF15Q12870 199 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 CALCOCO2Q13137 446 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 MTM1Q13496 603 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LAMB3Q13751 1172 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 FGL2Q14314 439 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 POU6F1Q14863 301 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 ACOX1Q15067 660 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 AGERQ15109 404 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 CNGA3Q16281 694 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 FNBP1LQ5T0N5 605 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 DENND2CQ68D51 928 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 RFLNAQ6ZTI6 216 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LPCAT2Q7L5N7 544 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 GLT6D1Q7Z4J2 308 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 HSD11B1LQ7Z5J1 315 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 TECPR1Q7Z6L1 1165 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 SLC41A1Q8IVJ1 513 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 RAVER1Q8IY67 606 aaKnown RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 TMEFF1Q8IYR6 380 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 TTC30BQ8N4P2 665 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 PRSS33Q8NF86 280 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 ASB12Q8WXK4 309 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 KLK6Q92876 244 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 CENPTQ96BT3 561 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 COQ10AQ96MF6 247 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 SERPINB12Q96P63 405 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 LENG8Q96PV6 779 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 RHOXF2Q9BQY4 288 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 FRMD8Q9BZ67 464 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 GPR63Q9BZJ6 419 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 IL22Q9GZX6 179 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 EBF2Q9HAK2 575 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 BFARQ9NZS9 450 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 COQ6Q9Y2Z9 468 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 ARL5AQ9Y689 179 aa7.54□□□□□ -1.2
AC004540.1-206ENST00000448056 A0A1W2PPC4 97 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ESYT3A0FGR9 886 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 MAGEB16A2A368 324 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 HEATR9A2RTY3 570 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 RAD51BO15315 384 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 SLC31A1O15431 190 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 BUD23O43709 281 aaKnown RBP7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 GDF9O60383 454 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PPFIA2O75334 1257 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 RECQL5O94762 991 aaPredicted RBP7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 RHOBTB1O94844 696 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 C1SP09871 688 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PSMA3P25788 255 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 MGAT1P26572 445 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CD27P26842 260 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 NUDT1P36639 197 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ETV3P41162 512 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PTGER3P43115 390 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 SPINT3P49223 89 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CRADDP78560 199 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PDE1BQ01064 536 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CBLBQ13191 982 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 SIM2Q14190 667 aaPredicted RBP7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PTPRCAPQ14761 206 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 WSCD2Q2TBF2 565 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PLK5Q496M5 336 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CCDC38Q502W7 563 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 SETMARQ53H47 684 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms