RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OR6P1Q8NGX9 317 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 FNDC8Q8TC99 324 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 TSPEARQ8WU66 669 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 TWIST2Q8WVJ9 160 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 CASP10Q92851 521 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 ITFG2Q969R8 447 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 HDAC10Q969S8 669 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 OSBPL6Q9BZF3 934 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 MPP6Q9NZW5 540 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 HS3ST4Q9Y661 456 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 PTPRDP23468 1912 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 hCG_2014768A0A024R1R8 64 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 PIP5K1BO14986 540 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 MSI1O43347 362 aaKnown RBP19.07■□□□□ 0.64
SDCBP-204ENST00000447182 RASAL1O95294 804 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 FCGR1AP12314 374 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 ARSDP51689 593 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 CDH13P55290 713 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 KLHL35Q6PF15 583 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 PIM3Q86V86 326 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 CLVS1Q8IUQ0 354 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-204ENST00000447182 COLGALT2Q8IYK4 626 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 UMODL1-AS1Q8N2C9 162 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 LRRC43Q8N309 656 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 PNPLA1Q8N8W4 532 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 TRPV3Q8NET8 790 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 LRRC58Q96CX6 371 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 PLGRKTQ9HBL7 147 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 SLC52A3Q9NQ40 469 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 RGS18Q9NS28 235 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 TMLHEQ9NVH6 421 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 MARCH4Q9P2E8 410 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-204ENST00000447182 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-204ENST00000447182 SFMBT1Q9UHJ3 866 aa19.07■□□□□ 0.64
SDCBP-204ENST00000447182 C17orf102A2RUQ5 167 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 ACOX3O15254 700 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 CYP11A1P05108 521 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 MMP2P08253 660 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 TTKP33981 857 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 CD86P42081 329 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 SUOXP51687 545 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 IRF5Q13568 498 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 TMTC4Q5T4D3 741 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 RAB44Q7Z6P3 723 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 C14orf80Q86SX3 495 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 CMTR2Q8IYT2 770 aaKnown RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 PTGR2Q8N8N7 351 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 NLGN2Q8NFZ4 835 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 RHEBL1Q8TAI7 183 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 SEPT8Q92599 483 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 C1orf74Q96LT6 269 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 PAAF1Q9BRP4 392 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 HIPK3Q9H422 1215 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 IL1RL2Q9HB29 575 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 POPDC3Q9HBV1 291 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 MID1IP1Q9NPA3 183 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 NT5MQ9NPB1 228 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 PCDHA9Q9Y5H5 950 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 HEMK1Q9Y5R4 338 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 ARL5CA6NH57 179 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 ARPC2O15144 300 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 GFAPP14136 432 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 LBPP18428 481 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 HOXC8P31273 242 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 MLLT6P55198 1093 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 ACVR1Q04771 509 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 GRB7Q14451 532 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 BLOC1S3Q6QNY0 202 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 PLEKHH3Q7Z736 793 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 LDB1Q86U70 411 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 METTL23Q86XA0 190 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 ZNF420Q8TAQ5 688 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 MIPOL1Q8TD10 442 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 SH3RF2Q8TEC5 729 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 TADA1Q96BN2 335 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 C12orf43Q96C57 262 aaKnown RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 PHF12Q96QT6 1004 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 TRIM54Q9BYV2 358 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 CHCHD3Q9NX63 227 aaKnown RBP19.06■□□□□ 0.64
SDCBP-204ENST00000447182 EBF1Q9UH73 591 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 EGFL7Q9UHF1 273 aa19.06■□□□□ 0.64
SDCBP-204ENST00000447182 RNF103-CHMP3A0A140T963 221 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 CASTOR2A6NHX0 329 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 VPS4BO75351 444 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 MTHFD2P13995 350 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 IDO1P14902 403 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 UGT1A6P19224 532 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 RPL10P27635 214 aaKnown RBP19.05■□□□□ 0.64
SDCBP-204ENST00000447182 MRPL19P49406 292 aaKnown RBP19.05■□□□□ 0.64
SDCBP-204ENST00000447182 TIAL1Q01085 375 aaKnown RBP eCLIP19.05■□□□□ 0.64
SDCBP-204ENST00000447182 CTBSQ01459 385 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 TNK2Q07912 1038 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 PTRH1Q86Y79 214 aaKnown RBP19.05■□□□□ 0.64
SDCBP-204ENST00000447182 DCP1BQ8IZD4 617 aaKnown RBP19.05■□□□□ 0.64
SDCBP-204ENST00000447182 OR52K2Q8NGK3 314 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 SLC10A4Q96EP9 437 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 DOK1Q99704 481 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 OAZ3Q9UMX2 235 aa19.05■□□□□ 0.64
SDCBP-204ENST00000447182 GIT1Q9Y2X7 761 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms