RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 MPP7Q5T2T1 576 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 PSAPL1Q6NUJ1 521 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 TCEAL4Q96EI5 215 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 PPP1R36Q96LQ0 422 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 OSBPL1AQ9BXW6 950 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 EMILIN2Q9BXX0 1053 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 WDR55Q9H6Y2 383 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 INTS6Q9UL03 887 aaKnown RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 GOLGA8QA0A0J9YX86 632 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 GOLGA8OA6NCC3 632 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 TMEM233B4DJY2 109 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 GOLGA8NF8WBI6 632 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 RFPL2O75678 378 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 IPO13O94829 963 aaKnown RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 CD1DP15813 335 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 NCF2P19878 526 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 CTNNB1P35222 781 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 SETMARQ53H47 684 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 SEL1L3Q68CR1 1132 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 RETSATQ6NUM9 610 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 RPS27LQ71UM5 84 aaKnown RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 SPRED2Q7Z698 418 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 CAMK1DQ8IU85 385 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 PHTF2Q8N3S3 785 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 MRPL43Q8N983 215 aaKnown RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 SHKBP1Q8TBC3 707 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 EID2BQ96D98 161 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 ZNF106Q9H2Y7 1883 aaKnown RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 DENND2DQ9H6A0 471 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 TCF7L2Q9NQB0 619 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 FNDC3AQ9Y2H6 1198 aaKnown RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 CHUKO15111 745 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 HNRNPLP14866 589 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■■□□□ 13.4
SMC6-206ENST00000446852 HOXB8P17481 243 aaPredicted RBP17.42■□□□□ 0.38
SMC6-206ENST00000446852 MC4RP32245 332 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 CLCN4P51793 760 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 AP1S1P61966 158 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 ILF2Q12905 390 aaKnown RBP17.42■□□□□ 0.38
SMC6-206ENST00000446852 PEX6Q13608 980 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 RALGPS1Q5JS13 557 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 PPM1LQ5SGD2 360 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 KDM1BQ8NB78 822 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 FIBINQ8TAL6 211 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 MAGEC3Q8TD91 643 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 ACDQ96AP0 544 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 NUF2Q9BZD4 464 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 POPDC3Q9HBV1 291 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 SPECC1L-ADORA2AF8WAN1 911 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 H3BMM5 538 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 NEMP1O14524 444 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 ALPIP09923 528 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 CTPS1P17812 591 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 EPHA3P29320 983 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 FMO4P31512 558 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 GKP32189 559 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 BMPR1AP36894 532 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 PLEKHG6Q3KR16 790 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 CMTM8Q8IZV2 173 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 PHF21BQ96EK2 531 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 MYO19Q96H55 970 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 RAD9AQ99638 391 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 EVLQ9UI08 416 aaPredicted RBP17.42■□□□□ 0.38
SMC6-206ENST00000446852 ARHGAP26Q9UNA1 814 aa17.42■□□□□ 0.38
SMC6-206ENST00000446852 STX7O15400 261 aaKnown RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 GPR39O43194 453 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 ZNF821O75541 412 aaPredicted RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 WFS1O76024 890 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 PGLSO95336 258 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 MNAT1P51948 309 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 HK2P52789 917 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 EPHB1P54762 984 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 TMPRSS6Q8IU80 811 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 PIH1D2Q8WWB5 315 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 MCUR1Q96AQ8 359 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 CCDC126Q96EE4 140 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 BIRC8Q96P09 236 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 TCF12Q99081 682 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 TMEM106CQ9BVX2 250 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 KIAA1522Q9P206 1035 aaPredicted RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 FAM50BQ9Y247 325 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 ZNF711Q9Y462 761 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 L3MBTL1Q9Y468 752 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 PRRC2BQ5JSZ5 2229 aaKnown RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 ANKRD12Q6UB98 2062 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 MEI4A8MW99 385 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 DCXO43602 365 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 MOSPD3O75425 235 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 NDUFS3O75489 264 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 SP100P23497 879 aaPredicted RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 PDAP1Q13442 181 aaKnown RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 ARMC12Q5T9G4 340 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 LYSMD3Q7Z3D4 306 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 RYBPQ8N488 228 aaPredicted RBP17.41■□□□□ 0.38
SMC6-206ENST00000446852 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 CNDP1Q96KN2 507 aa17.41■□□□□ 0.38
SMC6-206ENST00000446852 LMLNQ96KR4 655 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms