RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 NINJ2Q9NZG7 142 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 C3orf18Q9UK00 162 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TLR6Q9Y2C9 796 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 HES2Q9Y543 173 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 YDJCA8MPS7 323 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 MAN2B1O00754 1011 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 LILRA4P59901 499 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 HNRNPDQ14103 355 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 UNC5AQ6ZN44 842 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 LRRC74BQ6ZQY2 392 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 OAFQ86UD1 273 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 LINGO1Q96FE5 620 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 GDF3Q9NR23 364 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TLR9Q9NR96 1032 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 GULP1Q9UBP9 304 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 RAI2Q9Y5P3 530 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 EFCAB10A6NFE3 127 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 KCNU1A8MYU2 1149 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 INSIG1O15503 277 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CDK14O94921 469 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TARSP26639 723 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 LRPAP1P30533 357 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 FMO1Q01740 532 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TBX2Q13207 712 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TRIQKQ629K1 86 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 C11orf74Q86VG3 221 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 PHF10Q8WUB8 498 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 FAM136AQ96C01 138 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CRTAC1Q9NQ79 661 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 EIF2B3Q9NR50 452 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 IMP3Q9NV31 184 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 SNX7Q9UNH6 387 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 EDDM13A0A1B0GTR0 161 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TSPAN19P0C672 248 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 MANFP55145 182 aaKnown RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 COX10Q12887 443 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 RPTNQ6XPR3 784 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 RAD51AP1Q96B01 352 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CATSPER2Q96P56 530 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 CCDC177Q9NQR7 707 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 V9GYQ6 96 aa8.54□□□□□ -1.04
PTPN3-204ENST00000446349 TMEM150BA6NC51 233 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 FAM86C2PA6NEL3 165 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 MATN3O15232 486 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RASGRP1O95267 797 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PKMP14618 531 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 GPR33Q49SQ1 333 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 DET1Q7L5Y6 550 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 DEFB107AQ8IZN7 70 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PTGR2Q8N8N7 351 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 OR10G6Q8NH81 332 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SUSD3Q96L08 255 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RHBGQ9H310 441 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 STON1Q9Y6Q2 735 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 VEGFDO43915 354 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 C4BPAP04003 597 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PFKLP17858 780 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 HEPACAMQ14CZ8 416 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SULT1C3Q6IMI6 304 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 KIAA2013Q8IYS2 634 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SMYD1Q8NB12 490 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 HOPXQ9BPY8 73 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 MRPL45Q9BRJ2 306 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 BTBD10Q9BSF8 475 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 C22orf31O95567 290 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ITGB3BPQ13352 177 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SLC9A5Q14940 896 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 UBXN2BQ14CS0 331 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SPAG4Q9NPE6 437 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SAMD4AQ9UPU9 718 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 H2AFXP16104 143 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RCVRNP35243 200 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 APTXQ7Z2E3 356 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 MYDGFQ969H8 173 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SPATA9Q9BWV2 254 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ITM2CQ9NQX7 267 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PIGNO95427 931 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 CDH3P22223 829 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PTGER3P43115 390 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PKNOX1P55347 436 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PDZK1Q5T2W1 519 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 UNC5BQ8IZJ1 945 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 OR10H5Q8NGA6 315 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 TEX47Q8TBZ9 253 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 AP3S1Q92572 193 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 HDAC10Q969S8 669 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 CCM2Q9BSQ5 444 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 STRADBQ9C0K7 418 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PIGUQ9H490 435 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 GEMIN8Q9NWZ8 242 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RGSL1A5PLK6 1076 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ATP9AO75110 1047 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ADH1BP00325 375 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RB1P06400 928 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 PRG2P13727 222 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ACADLP28330 430 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SSTR1P30872 391 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 BRCC3P46736 316 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms