RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 DDR1Q08345 913 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 PTGR1Q14914 329 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 KRBOX4Q5JUW0 171 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 EPHA10Q5JZY3 1008 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 ATG9BQ674R7 924 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 KIAA0930Q6ICG6 404 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZNF449Q6P9G9 518 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 SHQ1Q6PI26 577 aaKnown RBP4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 PARM1Q6UWI2 310 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 IL20RBQ6UXL0 311 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 SLC16A12Q6ZSM3 486 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 CHST3Q7LGC8 479 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 TADA2BQ86TJ2 420 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 METTL23Q86XA0 190 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 EPHX4Q8IUS5 362 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 HORMAD2Q8N7B1 307 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 MCPH1Q8NEM0 835 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 APPL2Q8NEU8 664 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMEM163Q8TC26 289 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 DUSP19Q8WTR2 217 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 SCARB1Q8WTV0 552 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 DEPDC1BQ8WUY9 529 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 SIPA1Q96FS4 1042 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 HMCESQ96FZ2 354 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 CCDC34Q96HJ3 373 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 URB1-AS1Q96HZ7 61 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZNF333Q96JL9 665 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 POT1Q9NUX5 634 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 WDR35Q9P2L0 1181 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 FBXL17Q9UF56 701 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 NENFQ9UMX5 172 aa4.57□□□□□ -1.68
HMGB1P48-201ENST00000446155 A0A1W2PRG0 241 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 OR2A25A4D2G3 310 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 URADA6NGE7 173 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 C19orf81C9J6K1 198 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 STMND1H3BQB6 276 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 KIF1CO43896 1103 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZC3H11AO75152 810 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PSMD10O75832 226 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 IPO7O95373 1038 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 IL1AP01583 271 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 ABCB1P08183 1280 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 CCDC175P0C221 793 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 GNLYP22749 145 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 CPT2P23786 658 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 RYKP34925 604 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 KRT2P35908 639 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 AVPR1AP37288 418 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PPP3CCP48454 512 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 STAT2P52630 851 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PMS2P54278 862 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 BPIFB3P59826 476 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 CAMK2DQ13557 499 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 SMC1AQ14683 1233 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 E2F5Q15329 346 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PKN2Q16513 984 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 ASTE1Q2TB18 679 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZNF805Q5CZA5 627 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 HEPHL1Q6MZM0 1159 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 RAPH1Q70E73 1250 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 KBTBD6Q86V97 674 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 UNC45BQ8IWX7 931 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 TEX45Q8NA69 505 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 DNAAF1Q8NEP3 725 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 CEP76Q8TAP6 659 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 GDPD5Q8WTR4 605 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PSPC1Q8WXF1 523 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 ATOH1Q92858 354 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 GTF3C6Q969F1 213 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 MMABQ96EY8 250 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 NLRP4Q96MN2 994 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 FCRL4Q96PJ5 515 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 RAB3IPQ96QF0 476 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 CITED2Q99967 270 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 MRPL1Q9BYD6 325 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 SNTG1Q9NSN8 517 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 KIAA1456Q9P272 454 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PADI1Q9ULC6 663 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 A4GNTQ9UNA3 340 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 PPIEQ9UNP9 301 aaKnown RBP4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 KNSTRNQ9Y448 316 aa4.56□□□□□ -1.68
HMGB1P48-201ENST00000446155 ARHGAP10A1A4S6 786 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 I6L893 689 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 SCAMP1O15126 338 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 PTMAP06454 111 aaKnown RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 MMP3P08254 477 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 STMN1P16949 149 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 POU1F1P28069 291 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 DCTDP32321 178 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 GPR12P47775 334 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 PLCD1P51178 756 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 P2RX3P56373 397 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 CYP4A11Q02928 519 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 BAATQ14032 418 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZNF674Q2M3X9 581 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 PRTGQ2VWP7 1150 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 WASHC2DQ5SRD0 308 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 JADE1Q6IE81 842 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms