RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 TRAM1L1Q8N609 369 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 MDGA1Q8NFP4 955 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 ULK4Q96C45 1275 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 NECAB3Q96P71 396 aaPredicted RBP8.77□□□□□ -1.01
FXR1-203ENST00000445140 RHOXF2Q9BQY4 288 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 C1QTNF7Q9BXJ2 289 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 CXorf56Q9H5V9 222 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 SYBUQ9NX95 663 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 FAM53CQ9NYF3 392 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 WSB2Q9NYS7 404 aaPredicted RBP8.77□□□□□ -1.01
FXR1-203ENST00000445140 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.77□□□□□ -1.01
FXR1-203ENST00000445140 APPL1Q9UKG1 709 aa8.77□□□□□ -1.01
FXR1-203ENST00000445140 V9GYY5 206 aaPredicted RBP8.77□□□□□ -1.01
FXR1-203ENST00000445140 SZT2Q5T011 3432 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 IGLV3-16A0A075B6K0 115 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 IGHV1OR15-9A0A0B4J2B8 117 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 LRRC72A6NJI9 287 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 IL1BP01584 269 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 POLBP06746 335 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 CD6P30203 668 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 STX2P32856 288 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 HOXD12P35452 270 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 MAGEA4P43358 317 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 ARCN1P48444 511 aaKnown RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 POLD2P49005 469 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 SPINT3P49223 89 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 TPMTP51580 245 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 MSS51Q4VC12 460 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 HENMT1Q5T8I9 393 aaKnown RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 FBXL19Q6PCT2 694 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 AFTPHQ6ULP2 937 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 CROCCP2Q86T23 111 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 IQCHQ86VS3 1027 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 TDRPQ86YL5 185 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 MAML2Q8IZL2 1156 aaPredicted RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 RYBPQ8N488 228 aaPredicted RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 OR13J1Q8NGT2 312 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 GSDMBQ8TAX9 411 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 CALML6Q8TD86 181 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 ZC3H10Q96K80 434 aaKnown RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 TBATAQ96M53 351 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 FAM167BQ9BTA0 163 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 DUSP15Q9H1R2 295 aaPredicted RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 ZFYVE1Q9HBF4 777 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 TP53BP1Q12888 1972 aaPredicted RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 KLHL33A6NCF5 533 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 FAM159BA6NKW6 160 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 KPNA3O00505 521 aaPredicted RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 GAPDHSO14556 408 aaPredicted RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 RPS3P23396 243 aaKnown RBP eCLIP8.76□□□□□ -1.01
FXR1-203ENST00000445140 CHRNA4P43681 627 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 VPS41P49754 854 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 EPHB1P54762 984 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 XIAPP98170 497 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 GALNT3Q14435 633 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 ITIH4Q14624 930 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 ANKRD20A4Q4UJ75 823 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 PACS1Q6VY07 963 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 CERS6Q6ZMG9 384 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 MARK2Q7KZI7 788 aaKnown RBP8.76□□□□□ -1.01
FXR1-203ENST00000445140 GLT6D1Q7Z4J2 308 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 LRRC6Q86X45 466 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 HDDC3Q8N4P3 179 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 TMEM105Q8N8V8 129 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 DHRS4Q9BTZ2 278 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 ZSCAN5AQ9BUG6 496 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 MTG2Q9H4K7 406 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 EPHX3Q9H6B9 360 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 FBXL12Q9NXK8 326 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 SAMD15Q9P1V8 674 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 NFU1Q9UMS0 254 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 HS3ST3A1Q9Y663 406 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 COMMD10Q9Y6G5 202 aa8.76□□□□□ -1.01
FXR1-203ENST00000445140 PEX14O75381 377 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 ACADMP11310 421 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 MGAT1P26572 445 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 PHBP35232 272 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 SPAM1P38567 509 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 GRIA1P42261 906 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 KIAA1024LP59773 190 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 PTSQ03393 145 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 PDIA2Q13087 525 aaKnown RBP8.75□□□□□ -1.01
FXR1-203ENST00000445140 MTM1Q13496 603 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 CRYMQ14894 314 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 TRADDQ15628 312 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 ZNF284Q2VY69 593 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 AARS2Q5JTZ9 985 aaKnown RBP8.75□□□□□ -1.01
FXR1-203ENST00000445140 RNF187Q5TA31 235 aaPredicted RBP8.75□□□□□ -1.01
FXR1-203ENST00000445140 KIAA0895LQ68EN5 471 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 C1orf210Q8IVY1 113 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 DNAAF3Q8N9W5 541 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 ZBTB44Q8NCP5 570 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 RMDN1Q96DB5 314 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 C1QTNF1Q9BXJ1 281 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 EPB41L4BQ9H329 900 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 ACSS3Q9H6R3 686 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 VIPAS39Q9H9C1 493 aa8.75□□□□□ -1.01
FXR1-203ENST00000445140 INTS10Q9NVR2 710 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms