RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CCDC74AQ96AQ1 378 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 RNF25Q96BH1 459 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 EID2BQ96D98 161 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 PRR11Q96HE9 360 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 MRFAP1L1Q96HT8 127 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 OLFM3Q96PB7 478 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 CCDC3Q9BQI4 270 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 TEX101Q9BY14 249 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 FRMD8Q9BZ67 464 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 ABCG8Q9H221 673 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 WDR26Q9H7D7 661 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 SAE1Q9UBE0 346 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 GULP1Q9UBP9 304 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 PADI4Q9UM07 663 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 GPR34Q9UPC5 381 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 PLEKHM1Q9Y4G2 1056 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 HEY1Q9Y5J3 304 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 SDK2Q58EX2 2172 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 A0A087WV48 116 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 A0A1W2PQ67 120 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 A0A1W2PQM1 296 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 GOLGA6CA6NDK9 693 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 GOLGA6BA6NDN3 693 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 CAPN8A6NHC0 703 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 ZNF487B1APH4 448 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 CACNB4O00305 520 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 NTN3O00634 580 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 USP12O75317 370 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 CLDN7O95471 211 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 TNFP01375 233 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 GOLGA6DP0CG33 693 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 PECAM1P16284 738 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 AK4P27144 223 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 EIF2S3P41091 472 aaKnown RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 CD86P42081 329 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 BLKP51451 505 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 STC1P52823 247 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 DYNLT1P63172 113 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 IFI35P80217 286 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 TAZQ16635 292 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 RAET1GQ6H3X3 334 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 USP45Q70EL2 814 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 B3GNT8Q7Z7M8 397 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 GAS2L3Q86XJ1 694 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 GKN2Q86XP6 184 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 MAP7D3Q8IWC1 876 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 ARL10Q8N8L6 244 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 CCNYQ8ND76 341 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 LPCAT1Q8NF37 534 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 TPCN2Q8NHX9 752 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 ATXN7L3BQ96GX2 97 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 DEPDC7Q96QD5 511 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 PCDH9Q9HC56 1237 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 ASCL3Q9NQ33 180 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 SPATS2LQ9NUQ6 558 aaKnown RBP10.85□□□□□ -0.67
SF3A1-203ENST00000444440 GOLGA6AQ9NYA3 693 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 MOSPD1Q9UJG1 213 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 SUFUQ9UMX1 484 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 DOLKQ9UPQ8 538 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 SATB2Q9UPW6 733 aa10.85□□□□□ -0.67
SF3A1-203ENST00000444440 CACNA1GO43497 2377 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 B4DGG1 531 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 PSMD11O00231 422 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 TNFRSF10CO14798 259 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 LCA5LO95447 670 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 KRT10P13645 584 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 CDKN2BP42772 138 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 ZNF75DP51815 510 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 MAZP56270 477 aaKnown RBP10.84□□□□□ -0.67
SF3A1-203ENST00000444440 GABREP78334 506 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 CCL7P80098 99 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 DPTQ07507 201 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 AP1B1Q10567 949 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 ARHGEF7Q14155 803 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 GALNT3Q14435 633 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 QPCTQ16769 361 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 TBC1D25Q3MII6 688 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 C3orf38Q5JPI3 329 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 OGFOD3Q6PK18 319 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 DOK6Q6PKX4 331 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 TMPRSS9Q7Z410 1059 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 TAF8Q7Z7C8 310 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 PDZD3Q86UT5 571 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 VSIG1Q86XK7 387 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 RFX6Q8HWS3 928 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 SDR16C5Q8N3Y7 309 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
SF3A1-203ENST00000444440 GPBAR1Q8TDU6 330 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 PATE1Q8WXA2 126 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 TADA1Q96BN2 335 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 TRIB3Q96RU7 358 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 ABCG4Q9H172 646 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 SYNDIG1Q9H7V2 258 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 CARS2Q9HA77 564 aaKnown RBP10.84□□□□□ -0.67
SF3A1-203ENST00000444440 LUC7LQ9NQ29 371 aaKnown RBP10.84□□□□□ -0.67
SF3A1-203ENST00000444440 AMACRQ9UHK6 382 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 INTUQ9ULD6 942 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms