RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 IDO1P14902 403 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 CDH3P22223 829 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ARL2P36404 184 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 GRIA4P48058 902 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 CENPIQ92674 756 aaPredicted RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 KCNK4Q9NYG8 393 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 Q9Y3F1 56 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 SDK1Q7Z5N4 2213 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 UBXN7O94888 489 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 PIRTP0C851 137 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 LILRA4P59901 499 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 FNBP1LQ5T0N5 605 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 CTU1Q7Z7A3 348 aaKnown RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 PTGR2Q8N8N7 351 aaPredicted RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 OXNAD1Q96HP4 312 aaPredicted RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 TEKT5Q96M29 485 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 PDP2Q9P2J9 529 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 SHROOM3Q8TF72 1996 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 DCXO43602 365 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 NDST3O95803 873 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 DLGAP3O95886 979 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 CFIP05156 583 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 TFPIP10646 304 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 HOXB6P17509 224 aaKnown RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 CASRP41180 1078 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 TRIM32Q13049 653 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ITGB3BPQ13352 177 aaPredicted RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 TCHHL1Q5QJ38 904 aaPredicted RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ZNF398Q8TD17 642 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ATXN2LQ8WWM7 1075 aaKnown RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 SALL3Q9BXA9 1300 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 MEA1Q16626 185 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 MAGEB3O15480 346 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ACRP10323 421 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ACTR3P61158 418 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 PIWIL4Q7Z3Z4 852 aaKnown RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.22□□□□□ -0.61
FN1-211ENST00000443816 PCED1BQ96HM7 432 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 LMLNQ96KR4 655 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 ZNF354BQ96LW1 612 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 GOLGA2P5Q9HBQ8 144 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 TLR9Q9NR96 1032 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 MTRRQ9UBK8 725 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 GTF2IRD1Q9UHL9 959 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 SESN1Q9Y6P5 492 aa11.22□□□□□ -0.61
FN1-211ENST00000443816 PHRF1Q9P1Y6 1649 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 ERAL1O75616 437 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 TNFP01375 233 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 IFNGP01579 166 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 UBTFL6P0CB48 400 aaPredicted RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 DGKGP49619 791 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 UGT2B15P54855 530 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 NOMO3P69849 1222 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 FMO1Q01740 532 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 TTC23Q5W5X9 447 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 EIF1ADQ8N9N8 165 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 HEPHQ9BQS7 1158 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 MYLK2Q9H1R3 596 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 DHX33Q9H6R0 707 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 NEUROD4Q9HD90 331 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 NFAT5O94916 1531 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 IL6P05231 212 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 GNA12Q03113 381 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 ENPEPQ07075 957 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 ZCWPW2Q504Y3 356 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 DLG3Q92796 817 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.614e-15■□□□□ 10.6
FN1-211ENST00000443816 PRICKLE1Q96MT3 831 aaPredicted RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 TEFMQ96QE5 360 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 TMEM175Q9BSA9 504 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 SPATA9Q9BWV2 254 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 GBA3Q9H227 469 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 PNMA8CA0A1B0GUJ8 204 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 CAPN14A8MX76 684 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 PRMT5O14744 637 aaPredicted RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 BUD23O43709 281 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 CDK14O94921 469 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 SLC35G6P0C7Q6 338 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 CCNA2P20248 432 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 DGKEP52429 567 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 ATP12AP54707 1039 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 WNT3AP56704 352 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 STXBP1P61764 594 aaKnown RBP11.21□□□□□ -0.61
FN1-211ENST00000443816 TIMM50Q3ZCQ8 353 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 STK32CQ86UX6 486 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 ZNF671Q8TAW3 534 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 RORBQ92753 470 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 ARHGEF4Q9NR80 690 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
FN1-211ENST00000443816 GPR25O00155 361 aa11.21□□□□□ -0.62
FN1-211ENST00000443816 RCVRNP35243 200 aa11.21□□□□□ -0.62
FN1-211ENST00000443816 AP1S1P61966 158 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms