RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MZF1P28698 734 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 IL12RB1P42701 662 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 CLNS1AP54105 237 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 PITX1P78337 314 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 ELAVL3Q14576 367 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAXCQ5TGI0 409 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 NAIF1Q69YI7 327 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLHDC8BQ8IXV7 354 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 MPP5Q8N3R9 675 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 KCNV2Q8TDN2 545 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 NCSTNQ92542 709 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 AGAP3Q96P47 875 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 PANX3Q96QZ0 392 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 TTC1Q99614 292 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBRSL1Q9HCM7 1045 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZFP69BQ9UJL9 534 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 HS3ST4Q9Y661 456 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 HTTP42858 3142 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 A0A088AWK7 358 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM237BA0A1B0GVD1 139 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 F8W8V4 182 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 MID1O15344 667 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 CACNG3O60359 315 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 GCATO75600 419 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 POP4O95707 220 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLKB1P03952 638 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 PYGBP11216 843 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 STIP1P31948 543 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 SERPINB4P48594 390 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 HDAC4P56524 1084 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 YBEYP58557 167 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 PDK1Q15118 436 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 CST6Q15828 149 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 FUT11Q495W5 492 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 SETMARQ53H47 684 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMEM196Q5HYL7 178 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 DOK6Q6PKX4 331 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 TRIM48Q8IWZ4 208 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 CPXM2Q8N436 756 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMEM151AQ8N4L1 468 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 PYROXD1Q8WU10 500 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLHDC7BQ96G42 594 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 SRPK1Q96SB4 655 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLF6Q99612 283 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAGEB5Q9BZ81 275 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 OSBPL2Q9H1P3 480 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAGEH1Q9H213 219 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 VPS37BQ9H9H4 285 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 DNAJC28Q9NX36 388 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 KCNK4Q9NYG8 393 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 NYNRINQ9P2P1 1898 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 BRCA2P51587 3418 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 EME2A4GXA9 379 aaPredicted RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 NEMP2A6NFY4 417 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 TTC34A8MYJ7 566 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 FPGTO14772 594 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 HOXC11O43248 304 aaPredicted RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 PMPCBO75439 489 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 KRT36O76013 467 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 VNN2O95498 520 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 METTL18O95568 372 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 SERPINF2P08697 491 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 CRHR1P34998 444 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 ID4P47928 161 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARL4DP49703 201 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 NUBP1P53384 320 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 TSTA3Q13630 321 aaPredicted RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 KPNB1Q14974 876 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 LAIR1Q6GTX8 287 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 TIGD7Q6NT04 549 aaPredicted RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 KYAT3Q6YP21 454 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 UNC5AQ6ZN44 842 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 DGLUCYQ7Z3D6 616 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 FIBINQ8TAL6 211 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 NSL1Q96IY1 281 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 RSRC1Q96IZ7 334 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 KLHL32Q96NJ5 620 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC3BQ96PB8 259 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 CYTH2Q99418 400 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 WRAP53Q9BUR4 548 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 MECRQ9BV79 373 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 SNRNP25Q9BV90 132 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 TSSK1BQ9BXA7 367 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 OSGEPL1Q9H4B0 414 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 SMOC1Q9H4F8 434 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 PCDH18Q9HCL0 1135 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZFATQ9P243 1243 aa7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 MTO1Q9Y2Z2 717 aaKnown RBP7.4□□□□□ -1.23
CDC42BPA-208ENST00000442054 SPAG6O75602 509 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CNTN5O94779 1100 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 PSMG1O95456 288 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TOP3BO95985 862 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ADH1BP00325 375 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ALDOAP04075 364 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 GSTA2P09210 222 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 FGF3P11487 239 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 AKT1P31749 480 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms