RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ASB2Q96Q27 587 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 OMDQ99983 421 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 MCMBPQ9BTE3 642 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TRMOQ9BU70 441 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 MECRQ9BV79 373 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ZDHHC6Q9H6R6 413 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 NCKIPSDQ9NZQ3 722 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 FKBPLQ9UIM3 349 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 EMCNQ9ULC0 261 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ERVW-1Q9UQF0 538 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ACTL7AQ9Y615 435 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 C1orf232A0A0U1RR37 186 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CFAP99D6REC4 459 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 BUD23O43709 281 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 SNNO75324 88 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 DNAJC8O75937 253 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 PRAMEF12O95522 483 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PRLP01236 227 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 FGF3P11487 239 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 FDXRP22570 491 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 NUMBP49757 651 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 DNAJB13P59910 316 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 EIF4HQ15056 248 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 DHCR24Q15392 516 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TTLL9Q3SXZ7 439 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 C9orf50Q5SZB4 431 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CES5AQ6NT32 575 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TMC5Q6UXY8 1006 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TPRG1Q6ZUI0 275 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ACAD11Q709F0 780 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CAMK1DQ8IU85 385 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 RBFAQ8N0V3 343 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ARHGAP24Q8N264 748 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CCNYL1Q8N7R7 359 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 NXNL1Q96CM4 212 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ERP27Q96DN0 273 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 THOC1Q96FV9 657 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 NDNQ99608 321 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CIPCQ9C0C6 399 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TNKS2Q9H2K2 1166 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ECT2Q9H8V3 914 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 XPR1Q9UBH6 696 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 GNPTGQ9UJJ9 305 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PLA2G4CQ9UP65 541 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TRIM33Q9UPN9 1127 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 RAP2CQ9Y3L5 183 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CAPN7Q9Y6W3 813 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PLXNA4Q9HCM2 1894 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 GRXCR1A8MXD5 290 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 MYO1CO00159 1063 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PRMT5O14744 637 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 UBOX5O94941 541 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CD160O95971 181 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CCDC166P0CW27 439 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 MYOGP15173 224 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ZNF30P17039 623 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CTPS1P17812 591 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CD9P21926 228 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 GABRB3P28472 473 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 HMGCLP35914 325 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SCTRP47872 440 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 LIG3P49916 1009 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CCNHP51946 323 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 MNAT1P51948 309 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 IRF9Q00978 393 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 RCN2Q14257 317 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PTPRNQ16849 979 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SLC5A9Q2M3M2 681 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 FUT11Q495W5 492 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 RBM20Q5T481 1227 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 GDPD4Q6W3E5 623 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 EFL1Q7Z2Z2 1120 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 SNX20Q7Z614 316 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 DSG4Q86SJ6 1040 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 FSTL5Q8N475 847 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 KDM1BQ8NB78 822 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 HEXDCQ8WVB3 486 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PIH1D2Q8WWB5 315 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 KLHL29Q96CT2 875 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 RIPOR3Q96MK2 946 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CDH19Q9H159 772 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 TFB2MQ9H5Q4 396 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 NSUN3Q9H649 340 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 ABCF3Q9NUQ8 709 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-205ENST00000441602 OXSMQ9NWU1 459 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 DNAJC28Q9NX36 388 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 IL17CQ9P0M4 197 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 MARCH4Q9P2E8 410 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 CPSF2Q9P2I0 782 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 DEC1Q9P2X7 70 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 HEY2Q9UBP5 337 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CCL26Q9Y258 94 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ANAPC1Q9H1A4 1944 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 OR51F1A6NGY5 319 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 TRPC5OSA6NMA1 111 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 WASH3PC4AMC7 463 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 GIPC1O14908 333 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 DNAJC6O75061 913 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 MT-CO1P00395 513 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms