RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TAS2R13Q9NYV9 303 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 FKBPLQ9UIM3 349 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PCDHB9Q9Y5E1 797 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 BUD23O43709 281 aaKnown RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 DLX3O60479 287 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SMIM24O75264 130 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 MOSPD3O75425 235 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 VPS26AO75436 327 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 RFPL2O75678 378 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SRP72O76094 671 aaKnown RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 CSPG5O95196 566 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 PABPC1P11940 636 aaKnown RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 HMGCLP35914 325 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 CDKN2DP55273 166 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 ATP6V0D1P61421 351 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 KCNJ2P63252 427 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 RAD51Q06609 339 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SEMA3AQ14563 771 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 FBXW10Q5XX13 1052 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SEL1L3Q68CR1 1132 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 NAPRTQ6XQN6 538 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 CERS6Q6ZMG9 384 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF781Q8N8C0 355 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 RHEBL1Q8TAI7 183 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 TCEAL4Q96EI5 215 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 NSL1Q96IY1 281 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 CNDP1Q96KN2 507 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 TTC1Q99614 292 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SLC2A11Q9BYW1 496 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 MCOLN1Q9GZU1 580 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SMG9Q9H0W8 520 aaKnown RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF395Q9H8N7 513 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 EML4Q9HC35 981 aaKnown RBP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.15□□□□□ -0.3
CPSF4-206ENST00000441580 TMCO1Q9UM00 188 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 TRIM33Q9UPN9 1127 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 CRYL1Q9Y2S2 319 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
CPSF4-206ENST00000441580 A0A0J9YYE9 177 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 A8MT66 165 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 HDAC3O15379 428 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 WFS1O76024 890 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 IPO13O94829 963 aaKnown RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PIGNO95427 931 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PRAMEF12O95522 483 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TRBC1P01850 177 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 ESR1P03372 595 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 SRCP12931 536 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 CD1DP15813 335 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 EPCAMP16422 314 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TFEBP19484 476 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 AOC1P19801 751 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 ITGALP20701 1170 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 HLA-FP30511 346 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 ARRB2P32121 409 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 ABL2P42684 1182 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PTGER3P43115 390 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 RPL14P50914 215 aaKnown RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 GALNT1Q10472 559 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TUBB3Q13509 450 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 RIPK1Q13546 671 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PTPRCAPQ14761 206 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 LYPLAL1Q5VWZ2 237 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 UGT3A1Q6NUS8 523 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF549Q6P9A3 640 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 ACAD11Q709F0 780 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 USP45Q70EL2 814 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 LYSMD3Q7Z3D4 306 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 MAVSQ7Z434 540 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 RAB44Q7Z6P3 723 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TTC7BQ86TV6 843 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PIM3Q86V86 326 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 NKAPQ8N5F7 415 aaKnown RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PIH1D2Q8WWB5 315 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 KCNJ9Q92806 393 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 LYSMD1Q96S90 227 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 DERL2Q9GZP9 239 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TFB2MQ9H5Q4 396 aaKnown RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TLE6Q9H808 572 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 SPHK2Q9NRA0 654 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 KLC4Q9NSK0 619 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PNPOQ9NVS9 261 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 IL17CQ9P0M4 197 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 TAGLN3Q9UI15 199 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms