RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 DTLQ9NZJ0 730 aa12.89□□□□□ -0.35
BRPF3-203ENST00000441123 NFS1Q9Y697 457 aa12.89□□□□□ -0.35
BRPF3-203ENST00000441123 TMEM63AO94886 807 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 UROSP10746 265 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 HOXD13P35453 343 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 SLC5A3P53794 718 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 RAB14P61106 215 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 IL10RBQ08334 325 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 TRAP1Q12931 704 aaKnown RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 LCP2Q13094 533 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 SGCGQ13326 291 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 ARL13AQ5H913 290 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 ROGDIQ9GZN7 287 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 KCTD5Q9NXV2 234 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 KIAA1522Q9P206 1035 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 FAM159BA6NKW6 160 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 CLTBP09497 229 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 CRATP43155 626 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 ATN1P54259 1190 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 WDR4P57081 412 aaKnown RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 TAF5Q15542 800 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 TMEM110Q86TL2 294 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 SPATA6LQ8N4H0 392 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 USP7Q93009 1102 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 MAGEH1Q9H213 219 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 INTS10Q9NVR2 710 aaKnown RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 LYNP07948 512 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 TSPAN19P0C672 248 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 GSTM5P46439 218 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 CDH4P55283 916 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 LILRA4P59901 499 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF846Q147U1 533 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 LPCAT4Q643R3 524 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 DNAJB8Q8NHS0 232 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 SEC14L1Q92503 715 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 COPS8Q99627 209 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 G3V2T6 193 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 H3BN98 237 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 SPTLC1O15269 473 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 BRCC3P46736 316 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 TYW3Q6IPR3 259 aaKnown RBP12.88□□□□□ -0.35
BRPF3-203ENST00000441123 SPESP1Q6UW49 350 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 AGAP2Q99490 1192 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
BRPF3-203ENST00000441123 NPEPPSL1A6NEC2 478 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PRMT5O14744 637 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 BUD23O43709 281 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 HDCP19113 662 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 SLC25A11Q02978 314 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PRKCQQ04759 706 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PPM1JQ5JR12 505 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 OR2T12Q8NG77 320 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TRIM63Q969Q1 353 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 OR52E6Q96RD3 313 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 FCRL5Q96RD9 977 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 WDR12Q9GZL7 423 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 POLR3HQ9Y535 204 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PQBP1O60828 265 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 LRIG2O94898 1065 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PCDH8O95206 1070 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 VAV1P15498 845 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PAICSP22234 425 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 SKP1P63208 163 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TRIM40Q6P9F5 258 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 AMIGO2Q86SJ2 522 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 DPP10Q8N608 796 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 WDR48Q8TAF3 677 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 DGCR6LQ9BY27 220 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 C1orf21Q9H246 121 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TACR2P21452 398 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 HSPA14Q0VDF9 509 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TAB1Q15750 504 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 HIPK1Q86Z02 1210 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 REXO5Q96IC2 774 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms