RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 HERC2P3Q9BVR0 1158 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ACE2Q9BYF1 805 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 WBP1LQ9NX94 342 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.18□□□□□ -0.14
LIMD1-202ENST00000440097 PCDHB12Q9Y5F1 795 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 ARL5AQ9Y689 179 aa14.18□□□□□ -0.14
LIMD1-202ENST00000440097 LOC100653049A0A140TA62 436 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TRIM43BA6NCK2 446 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 OR51F1A6NGY5 319 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 DENRO43583 198 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ATP6V1G1O75348 118 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 KRT34O76011 436 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TIMP1P01033 207 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 HDCP19113 662 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 GALK1P51570 392 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ADARP55265 1226 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 C1orf53Q5VUE5 145 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 DDX53Q86TM3 631 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 KBTBD6Q86V97 674 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CEP97Q8IW35 865 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CNTN4Q8IWV2 1026 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 FBXW8Q8N3Y1 598 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TRIM43Q96BQ3 446 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 SUDS3Q9H7L9 328 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 APPL1Q9UKG1 709 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 SSX2IPQ9Y2D8 614 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TYW5A2RUC4 315 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TBL1XO60907 577 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CKMP06732 381 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 SLC35E2BP0CK96 405 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 PCSK6P29122 969 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TMED1Q13445 227 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CYLC2Q14093 348 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 GK3PQ14409 553 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 PTPRCAPQ14761 206 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 DBN1Q16643 649 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 PAOXQ6QHF9 649 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 HERC6Q8IVU3 1022 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TMEM199Q8N511 208 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 C2CD4AQ8NCU7 369 aaPredicted RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 OR13J1Q8NGT2 312 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 PDFQ9HBH1 243 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 FNDC3AQ9Y2H6 1198 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 MYLKQ15746 1914 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ARSDP51689 593 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TAS2R39P59534 338 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ABCE1P61221 599 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ZNF789Q5FWF6 425 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 FRMD7Q6ZUT3 714 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 MAVSQ7Z434 540 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CMTR2Q8IYT2 770 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CEP70Q8NHQ1 597 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 GAB3Q8WWW8 586 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TRMT2BQ96GJ1 504 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 CNBD2Q96M20 576 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 TBATAQ96M53 351 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ZNF599Q96NL3 588 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 MRPS26Q9BYN8 205 aaKnown RBP14.17□□□□□ -0.14
LIMD1-202ENST00000440097 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 DMTF1Q9Y222 760 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 ANKRD6Q9Y2G4 727 aa14.17□□□□□ -0.14
LIMD1-202ENST00000440097 FGF1P05230 155 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 ATXN1LP0C7T5 689 aaKnown RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 HLA-DPA1P20036 260 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 GABRR2P28476 465 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 RBM20Q5T481 1227 aaKnown RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 DUS1LQ6P1R4 473 aaKnown RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CLEC14AQ86T13 490 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 ITIH5Q86UX2 942 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 MFSD6LQ8IWD5 586 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 NXNL1Q96CM4 212 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 MCMBPQ9BTE3 642 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 KLF16Q9BXK1 252 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 PNPOQ9NVS9 261 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 MID2Q9UJV3 735 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 VPS28Q9UK41 221 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 PACSIN3Q9UKS6 424 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CRYL1Q9Y2S2 319 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CPQQ9Y646 472 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 REV3LO60673 3130 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 LOC285095A0A1B0GVY8 99 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 ILVBLA1L0T0 632 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 KDELR3O43731 214 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 TRIM13O60858 407 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 FGF18O76093 207 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CRTAMO95727 393 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 NCF2P19878 526 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 PPM1AP35813 382 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 RGRP47804 291 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 IDH3AP50213 366 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 EMP3P54852 163 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CYP4F8P98187 520 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 MYBPC1Q00872 1141 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CDH18Q13634 790 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 CSHL1Q14406 222 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 VWA5B1Q5TIE3 1220 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms