RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 KIAA2013Q8IYS2 634 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 ZNF567Q8N184 647 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 CBARPQ8N350 705 aaPredicted RBP7.5□□□□□ -1.21
COPS3-203ENST00000439936 PAF1Q8N7H5 531 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 SPATA22Q8NHS9 363 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 CEP76Q8TAP6 659 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 SLC35B2Q8TB61 432 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 PDCD6IPQ8WUM4 868 aaKnown RBP7.5□□□□□ -1.21
COPS3-203ENST00000439936 TCEAL3Q969E4 200 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 TADA1Q96BN2 335 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 IMP4Q96G21 291 aaKnown RBP7.5□□□□□ -1.21
COPS3-203ENST00000439936 QKIQ96PU8 341 aaKnown RBP eCLIP7.5□□□□□ -1.21
COPS3-203ENST00000439936 RBM15Q96T37 977 aaKnown RBP eCLIP7.5□□□□□ -1.21
COPS3-203ENST00000439936 SLC17A9Q9BYT1 436 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 SLC25A51Q9H1U9 297 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 TM9SF3Q9HD45 589 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 PCDH12Q9NPG4 1184 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 FSCN3Q9NQT6 498 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 RXFP3Q9NSD7 469 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 ZFATQ9P243 1243 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 TPX2Q9ULW0 747 aaKnown RBP7.5□□□□□ -1.21
COPS3-203ENST00000439936 PHTF1Q9UMS5 762 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 PPIL1Q9Y3C6 166 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 RAI2Q9Y5P3 530 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.5□□□□□ -1.21
COPS3-203ENST00000439936 FRYLO94915 3013 aa7.5□□□□□ -1.21
COPS3-203ENST00000439936 A0A1W2PQ67 120 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 A0A1W2PR77 199 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 A6NHS1 94 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 PRR5-ARHGAP8B1AHC4 643 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 KCNN4O15554 427 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 KIF5CO60282 957 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SOCS5O75159 536 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SASH3O75995 380 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 PGLSO95336 258 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 MT-CYBP00156 380 aaPredicted RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 CPP00450 1065 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 WNT1P04628 370 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ATP1A1P05023 1023 aaKnown RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 CFIP05156 583 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 PRLRP16471 622 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 HOXD12P35452 270 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 NUDT1P36639 197 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 RACK1P63244 317 aaKnown RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 BNC1Q01954 994 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ELP6Q0PNE2 266 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SGCGQ13326 291 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 DOC2BQ14184 412 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SIX1Q15475 284 aaPredicted RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 TRIM61Q5EBN2 209 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ANKRD20A2Q5SQ80 823 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 CFAP58Q5T655 872 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ARMC12Q5T9G4 340 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ANKRD20A1Q5TYW2 823 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ANKRD20A3Q5VUR7 823 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 LIPIQ6XZB0 460 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 PRR23CQ6ZRP0 262 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 KDELC2Q7Z4H8 507 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 RABEPKQ7Z6M1 372 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 RAB44Q7Z6P3 723 aaPredicted RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 KRTAP1-3Q8IUG1 177 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ZCCHC9Q8N567 271 aaKnown RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 C1orf54Q8WWF1 131 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ASB12Q8WXK4 309 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 ATG4AQ8WYN0 398 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 TRIM44Q96DX7 344 aaPredicted RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 SCRN2Q96FV2 425 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SERAC1Q96JX3 654 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 PBKQ96KB5 322 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 BMFQ96LC9 184 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SMIM14Q96QK8 99 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 FCRL5Q96RD9 977 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 VAT1Q99536 393 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 WRAP53Q9BUR4 548 aaKnown RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 NUSAP1Q9BXS6 441 aaKnown RBP7.49□□□□□ -1.21
COPS3-203ENST00000439936 PCDH9Q9HC56 1237 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 CAPN10Q9HC96 672 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 HAUS2Q9NVX0 235 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 UBP1Q9NZI7 540 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 TRHDEQ9UKU6 1024 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 DNPEPQ9ULA0 475 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 DMTF1Q9Y222 760 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 CA5BQ9Y2D0 317 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 COQ6Q9Y2Z9 468 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 HS3ST3A1Q9Y663 406 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 TMEM131Q92545 1883 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 CACNA1EQ15878 2313 aa7.49□□□□□ -1.21
COPS3-203ENST00000439936 A0A0U1RQS6 177 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 A0A1B0GVT2 93 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 CFAP69A5D8W1 941 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 POM121BA6NF01 834 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 C5orf60A6NFR6 353 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 ANKRD66B4E2M5 251 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 PRAMEF26H0Y7S4 382 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 CDX4O14627 284 aaPredicted RBP7.48□□□□□ -1.21
COPS3-203ENST00000439936 RAD51BO15315 384 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 LIASO43766 372 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 TM7SF2O76062 418 aa7.48□□□□□ -1.21
COPS3-203ENST00000439936 FGGP02679 453 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms