RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 VSTM4Q8IW00 320 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 SPACA3Q8IXA5 215 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 CCDC13Q8IYE1 715 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 SLC35G2Q8TBE7 412 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 PIH1D2Q8WWB5 315 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 FAF2Q96CS3 445 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 AP2M1Q96CW1 435 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 HDAC11Q96DB2 347 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 HIC2Q96JB3 615 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 SLC46A1Q96NT5 459 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 FCRL3Q96P31 734 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-204ENST00000439619 UBL7Q96S82 380 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-204ENST00000439619 DPH1Q9BZG8 443 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 TRNAU1APQ9NX07 287 aaKnown RBP18.78■□□□□ 0.6
CCDC78-204ENST00000439619 APPL1Q9UKG1 709 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 A0A0J9YYE9 177 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 ZNF487B1APH4 448 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 NUDT21O43809 227 aaKnown RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 FZD6O60353 706 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 MAP3K6O95382 1288 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 TRBC1P01850 177 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 ZFXP17010 805 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 KDELR1P24390 212 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 GNPDA1P46926 289 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 INHBCP55103 352 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 DSC2Q02487 901 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 TLE3Q04726 772 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 ASTE1Q2TB18 679 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 CERCAMQ5T4B2 595 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 TSPAN33Q86UF1 283 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 CCNJLQ8IV13 435 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 RAVER1Q8IY67 606 aaKnown RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 CBARPQ8N350 705 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 LIN37Q96GY3 246 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 NAF1Q96HR8 494 aaKnown RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 RNF157Q96PX1 679 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 ADGRE3Q9BY15 652 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 LRRN3Q9H3W5 708 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 SUDS3Q9H7L9 328 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 NHEJ1Q9H9Q4 299 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-204ENST00000439619 EPB41L5Q9HCM4 733 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 LRIT1Q9P2V4 623 aa18.77■□□□□ 0.6
CCDC78-204ENST00000439619 KNTC1P50748 2209 aa18.77■□□□□ 0.59
CCDC78-204ENST00000439619 TDRD6O60522 2096 aaKnown RBP18.77■□□□□ 0.59
CCDC78-204ENST00000439619 URB1O60287 2271 aaKnown RBP18.76■□□□□ 0.59
CCDC78-204ENST00000439619 NBEAQ8NFP9 2946 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 D6RAR5 112 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 MFAP3LO75121 409 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 CEACAM5P06731 702 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 PDHA1P08559 390 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 TMPRSS3P57727 454 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 CCL7P80098 99 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 GBE1Q04446 702 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 ZNF765Q7L2R6 523 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 GPR155Q7Z3F1 870 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 TECPR1Q7Z6L1 1165 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 NLRP8Q86W28 1048 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 VSIG1Q86XK7 387 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 NRSN1Q8IZ57 195 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 Q8N9G6 341 aaPredicted RBP18.76■□□□□ 0.59
CCDC78-204ENST00000439619 GPBAR1Q8TDU6 330 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 TDRD1Q9BXT4 1180 aaKnown RBP18.76■□□□□ 0.59
CCDC78-204ENST00000439619 FRMD8Q9BZ67 464 aaPredicted RBP18.76■□□□□ 0.59
CCDC78-204ENST00000439619 CDH19Q9H159 772 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 PRORYQ9H606 182 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 PCDH9Q9HC56 1237 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 ASCL3Q9NQ33 180 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 DTLQ9NZJ0 730 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 SUFUQ9UMX1 484 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 CHKBQ9Y259 395 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 HEY1Q9Y5J3 304 aa18.76■□□□□ 0.59
CCDC78-204ENST00000439619 CAPN8A6NHC0 703 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 RHPN2P1A8MT19 583 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 APOL1O14791 398 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 PLD2O14939 933 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 KLK10O43240 276 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 TNFSF15O95150 251 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 ITGA2BP08514 1039 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 SLC1A1P43005 524 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 CXADRP78310 365 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 PDK1Q15118 436 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 SOWAHCQ53LP3 525 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-204ENST00000439619 KCTD16Q68DU8 428 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 ADAMTSL4Q6UY14 1074 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 NYAP1Q6ZVC0 841 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 RAB11FIP2Q7L804 512 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 PELI3Q8N2H9 469 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 FBXO39Q8N4B4 442 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 PQLC3Q8N755 202 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 RNF214Q8ND24 703 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 LPCAT1Q8NF37 534 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 CCHCR1Q8TD31 782 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 RAPGEF5Q92565 580 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 TMEM159Q96B96 161 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 CRELD1Q96HD1 420 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 DDX56Q9NY93 547 aaKnown RBP18.75■□□□□ 0.59
CCDC78-204ENST00000439619 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.75■□□□□ 0.59
CCDC78-204ENST00000439619 AKAP7Q9P0M2 348 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-204ENST00000439619 CD84Q9UIB8 345 aa18.75■□□□□ 0.59
CCDC78-204ENST00000439619 INTUQ9ULD6 942 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms