RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HHATQ5VTY9 493 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 KIAA0930Q6ICG6 404 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CES5AQ6NT32 575 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ANKRD54Q6NXT1 300 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRMT10BQ6PF06 316 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMC5Q6UXY8 1006 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 KIAA0408Q6ZU52 694 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCDC91Q7Z6B0 441 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 STRA8Q7Z7C7 330 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ADGRD2Q7Z7M1 963 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GPR149Q86SP6 731 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SDCCAG8Q86SQ7 713 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 LCA5Q86VQ0 697 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 KCNMB4Q86W47 210 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 RASSF3Q86WH2 238 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARID3BQ8IVW6 561 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TDHQ8IZJ6 230 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ADGRG2Q8IZP9 1017 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NDUFAF2Q8N183 169 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PGBD5Q8N414 524 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PCDH20Q8N6Y1 951 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 EFHBQ8N7U6 833 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CALML6Q8TD86 181 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 BRSK1Q8TDC3 778 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 WFIKKN2Q8TEU8 576 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 WFDC12Q8WWY7 111 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SMARCD2Q92925 531 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PTPRN2Q92932 1015 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TIFAQ96CG3 184 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 RMDN1Q96DB5 314 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ALG14Q96F25 216 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF419Q96HQ0 510 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CABS1Q96KC9 395 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZSWIM3Q96MP5 696 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 FCRL3Q96P31 734 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TUBGCP5Q96RT8 1024 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRIB3Q96RU7 358 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 C19orf43Q9BQ61 176 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 APOL2Q9BQE5 337 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM167BQ9BTA0 163 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 BBS2Q9BXC9 721 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NRSN2Q9GZP1 204 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 IQCGQ9H095 443 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 EPN3Q9H201 632 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NSUN3Q9H649 340 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 AKTIPQ9H8T0 292 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CERS4Q9HA82 394 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRPV4Q9HBA0 871 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PLAC1Q9HBJ0 212 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 NOD2Q9HC29 1040 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPHK2Q9NRA0 654 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CHRAC1Q9NRG0 131 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 DUS2Q9NX74 493 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CTNNAL1Q9UBT7 734 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 VPS51Q9UID3 782 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 GGT7Q9UJ14 662 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC8A2Q9UPR5 921 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCL26Q9Y258 94 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 TCAF1Q9Y4C2 921 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 C2orf16Q68DN1 1984 aa3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 RANBP2P49792 3224 aaKnown RBP3.99□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRRC2BQ5JSZ5 2229 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MYLKQ15746 1914 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 A0A1W2PPM1 405 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CXorf49A8MYA2 514 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ANKRD66B4E2M5 251 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 COPEO14579 308 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SCAMP3O14828 347 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MUSKO15146 869 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 HOXC11O43248 304 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TYROBPO43914 113 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SNAP91O60641 907 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SOCS5O75159 536 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 RPP40O75818 363 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 VAPBO95292 243 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRAMEF12O95522 483 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CD160O95971 181 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MPOP05164 745 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATP5BP06576 529 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SRPRAP08240 638 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 GSTA1P08263 222 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 GSTP1P09211 210 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATXN1LP0C7T5 689 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ERVK-10P10266 1014 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PABPC1P11940 636 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 COL6A2P12110 1019 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TYRP14679 529 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 POLR2EP19388 210 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LPOP22079 712 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NME2P22392 152 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 GLDCP23378 1020 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 VAMP1P23763 118 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PSMA3P25788 255 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NMBRP28336 390 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CRABP2P29373 138 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NOS3P29474 1203 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TYK2P29597 1187 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SERPINA4P29622 427 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms