RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RSL1D1O76021 490 aaKnown RBP13.56□□□□□ -0.24
PCNX3-202ENST00000439247 SIX3O95343 332 aaPredicted RBP13.56□□□□□ -0.24
PCNX3-202ENST00000439247 SLC6A2P23975 617 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 AKAP5P24588 427 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 ADRA1BP35368 520 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 RPS9P46781 194 aaKnown RBP13.56□□□□□ -0.24
PCNX3-202ENST00000439247 CXCR3P49682 368 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 SLC12A2P55011 1212 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 SREBF2Q12772 1141 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 AQP6Q13520 282 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 PLA2G4EQ3MJ16 856 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 MYRFLQ96LU7 910 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 FICDQ9BVA6 458 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 DGCR6LQ9BY27 220 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 BRD8Q9H0E9 1235 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 ADNPQ9H2P0 1102 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 TLR9Q9NR96 1032 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 RCOR3Q9P2K3 495 aaPredicted RBP13.56□□□□□ -0.24
PCNX3-202ENST00000439247 VPS51Q9UID3 782 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 BTRCQ9Y297 605 aa13.56□□□□□ -0.24
PCNX3-202ENST00000439247 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 TSPAN1O60635 241 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 PMPCBO75439 489 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 OXSR1O95747 527 aaPredicted RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 FYNP06241 537 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 PCNAP12004 261 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 CPB1P15086 417 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 ZNF24P17028 368 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 RCVRNP35243 200 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 DNASE1L3Q13609 305 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 INPP5AQ14642 412 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 GEN1Q17RS7 908 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 DEFB115Q30KQ5 88 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 CELF3Q5SZQ8 465 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 MORN1Q5T089 497 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 ANKRD34AQ69YU3 496 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 XAF1Q6GPH4 301 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 PKN3Q6P5Z2 889 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 SPRED1Q7Z699 444 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 PIM3Q86V86 326 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 TEKT5Q96M29 485 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 EIF2AQ9BY44 585 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 KIAA1522Q9P206 1035 aaPredicted RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 GNPTGQ9UJJ9 305 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 FAM32AQ9Y421 112 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 A0A1B0GTL3 188 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 MAGEB16A2A368 324 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 ASB14A6NK59 587 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 GAS2O43903 313 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 NOL3O60936 208 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 GFAPP14136 432 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 ACADVLP49748 655 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 IMPG1Q17R60 797 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 RYBPQ8N488 228 aaPredicted RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 C19orf60Q96EN9 201 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 FEM1CQ96JP0 617 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 TEX37Q96LM6 180 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 TCF3P15923 654 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 STX1BP61266 288 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 ATP6V0D1P61421 351 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 SH3BP2P78314 561 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 IFITM3Q01628 133 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 KCNC4Q03721 635 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 FRG1Q14331 258 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 POLD3Q15054 466 aaPredicted RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 CARTPTQ16568 116 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 TRPV3Q8NET8 790 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 NUDT8Q8WV74 236 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 EDEM1Q92611 657 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 NSUN5Q96P11 429 aaKnown RBP13.55□□□□□ -0.24
PCNX3-202ENST00000439247 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 TINF2Q9BSI4 451 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
PCNX3-202ENST00000439247 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 DFFAO00273 331 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 ANGPT2O15123 496 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 CLPXO76031 633 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 BAIAP3O94812 1187 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 TGFB3P10600 412 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 HADHAP40939 763 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 RAD23AP54725 363 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 DIO3P55073 304 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 SNX16P57768 344 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 PPP1R8Q12972 351 aaKnown RBP13.54□□□□□ -0.24
PCNX3-202ENST00000439247 ACAP2Q15057 778 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 PGS1Q32NB8 556 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 CADM3Q8N126 398 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
PCNX3-202ENST00000439247 TRUB1Q8WWH5 349 aaKnown RBP13.54□□□□□ -0.24
PCNX3-202ENST00000439247 HPS1Q92902 700 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms