RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 RTN3O95197 1032 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PAPSS2O95340 614 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 F9P00740 461 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PRSS2P07478 247 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 MMP3P08254 477 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 FCGR1AP12314 374 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 DPEP1P16444 411 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 NAGAP17050 411 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 EDN2P20800 178 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 HMGB2P26583 209 aaKnown RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 MAP2K2P36507 400 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PDLIM4P50479 330 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 ART1P52961 327 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 NUDT6P53370 316 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 LMOD3Q0VAK6 560 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 SLC9B1Q4ZJI4 515 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 NCAPH2Q6IBW4 605 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PRSS57Q6UWY2 283 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 C17orf99Q6UX52 265 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 ATF7IPQ6VMQ6 1270 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 MON1BQ7L1V2 547 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PRSS45Q7RTY3 260 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 TADA2BQ86TJ2 420 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 GPAT4Q86UL3 456 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 FAM160B2Q86V87 743 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 ARMC8Q8IUR7 673 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 MCPH1Q8NEM0 835 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZCCHC10Q8TBK6 192 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 NOC3LQ8WTT2 800 aaKnown RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 FAM216AQ8WUB2 273 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 GFM1Q96RP9 751 aaKnown RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 MSTO1Q9BUK6 570 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 MAF1Q9H063 256 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 IL25Q9H293 177 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 UNC45AQ9H3U1 944 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZHX3Q9H4I2 956 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 WDR6Q9NNW5 1121 aaKnown RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 SNTG1Q9NSN8 517 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 SLC25A10Q9UBX3 287 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 TMEM98Q9Y2Y6 226 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PCDHGB5Q9Y5G0 923 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 QSER1Q2KHR3 1735 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 PKD1L3Q7Z443 1732 aa3.44□□□□□ -1.86
HMGB3P12-201ENST00000438745 COL5A2P05997 1499 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ANKRD30AQ9BXX3 1397 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 PLEKHH1Q9ULM0 1364 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 IGLV5-52A0A0A0MRZ9 124 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 GOLGA6L10A0A0M3HER8 536 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ARHGAP10A1A4S6 786 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 IFNL4K9M1U5 179 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 GALTP07902 379 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 COX7A2P14406 83 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 SLC2A4P14672 509 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 YWHAQP27348 245 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 POU1F1P28069 291 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 CCR9P51686 369 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 CLCN5P51795 746 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 GEMIN4P57678 1058 aaKnown RBP3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 BNC1Q01954 994 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 NEXNQ0ZGT2 675 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 CAPSQ13938 189 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 RUNX2Q13950 521 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 KRT32Q14532 448 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 VEPH1Q14D04 833 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 RALBP1Q15311 655 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 TAF11Q15544 211 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 CCDC30Q5VVM6 783 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 NAA35Q5VZE5 725 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ATG9BQ674R7 924 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 HAUS3Q68CZ6 603 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 CES5AQ6NT32 575 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 TMEM81Q6P7N7 255 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 SMIM5Q71RC9 77 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 RRM2BQ7LG56 351 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 C16orf82Q7Z2V1 217 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ARMC9Q7Z3E5 817 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZMIZ2Q8NF64 920 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 TMEM18Q96B42 140 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 SKA1Q96BD8 255 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 SLC25A33Q9BSK2 321 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 UBA5Q9GZZ9 404 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 PDCL3Q9H2J4 239 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 C6orf106Q9H6K1 298 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 HCN3Q9P1Z3 774 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ORC3Q9UBD5 711 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZNF69Q9UC07 566 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZNF112Q9UJU3 913 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 SARDHQ9UL12 918 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 AGO1Q9UL18 857 aaKnown RBP3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 SRPRBQ9Y5M8 271 aaKnown RBP3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 TRPM1Q7Z4N2 1603 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 IQGAP3Q86VI3 1631 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 MYOM3Q5VTT5 1437 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 PIK3C2AO00443 1686 aa3.43□□□□□ -1.86
HMGB3P12-201ENST00000438745 CACNA1AO00555 2505 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 VIRMAQ69YN4 1812 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 FMN2Q9NZ56 1722 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 CLTCL1P53675 1640 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 TYW5A2RUC4 315 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 GAGE10A6NGK3 116 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms