RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CCP110O43303 1012 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 RECQL5O94762 991 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 LRIG2O94898 1065 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 ECEL1O95672 775 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 PNMA6AP0CW24 399 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 THRAP10827 490 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 CCNB1P14635 433 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 ADRA1BP35368 520 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 CLCN1P35523 988 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 CCZ1BP86790 482 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 CCZ1P86791 482 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 ILF3Q12906 894 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■■□□ 17.6
LINC01088-201ENST00000437737 GRM3Q14832 879 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 NR1D2Q14995 579 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 INO80DQ53TQ3 878 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 TDRD12Q587J7 1177 aaKnown RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 FHL5Q5TD97 284 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 C16orf46Q6P387 395 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 WDR59Q6PJI9 974 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 KDELC2Q7Z4H8 507 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 ZNF677Q86XU0 584 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 UNC5BQ8IZJ1 945 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 TXLNBQ8N3L3 684 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 EMC1Q8N766 993 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 PAF1Q8N7H5 531 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 TEX19Q8NA77 164 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 MSANTD4Q8NCY6 345 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 LGR4Q9BXB1 951 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 WDR26Q9H7D7 661 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 NHEJ1Q9H9Q4 299 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 AJAP1Q9UKB5 411 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 PILRAQ9UKJ1 303 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC01088-201ENST00000437737 CREBBPQ92793 2442 aa14.09□□□□□ -0.15
LINC01088-201ENST00000437737 LOC101059948A0A1B0GTJ6 334 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 B4E171 279 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 FAM72CH0Y354 149 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 PDE2AO00408 941 aaPredicted RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 VPS4BO75351 444 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 FGF1P05230 155 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 ELFN1P0C7U0 828 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 NR1D1P20393 614 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 MAP4P27816 1152 aaKnown RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 CDH5P33151 784 aaPredicted RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 TSPAN7P41732 249 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 GPR3P46089 330 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 UQCRFS1P47985 274 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 MC1RQ01726 317 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 SPA17Q15506 151 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 RAB6CQ53S08 254 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 FAM72AQ5TYM5 149 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 FAM72DQ6L9T8 149 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 BRAT1Q6PJG6 821 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 C17orf82Q86X59 251 aaPredicted RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 FAM72BQ86X60 149 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 TMEM139Q8IV31 216 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 STARD8Q92502 1023 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 ZNF830Q96NB3 372 aaPredicted RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 TEFMQ96QE5 360 aaKnown RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 KLC2Q9H0B6 622 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 RAB6CQ9H0N0 254 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 METTL5Q9NRN9 209 aaKnown RBP14.08□□□□□ -0.16
LINC01088-201ENST00000437737 TMEM9Q9P0T7 183 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 TAAR2Q9P1P5 351 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 LHX3Q9UBR4 397 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 TMEM59LQ9UK28 342 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 VPS4AQ9UN37 437 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 NEU3Q9UQ49 428 aa14.08□□□□□ -0.16
LINC01088-201ENST00000437737 UNC79Q9P2D8 2635 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 AKR1B10O60218 316 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 PLEKP08567 350 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-201ENST00000437737 HOXC4P09017 264 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-201ENST00000437737 TCN2P20062 427 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 AK4P27144 223 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-201ENST00000437737 CSF2RBP32927 897 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 MAN1A1P33908 653 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 C15orf59Q2T9L4 293 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-201ENST00000437737 ATP1A1-AS1Q5TC04 95 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 TAF3Q5VWG9 929 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 HGSNATQ68CP4 663 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 SLC30A9Q6PML9 568 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 PHLDB2Q86SQ0 1253 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 ZSWIM9Q86XI8 627 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 NRROSQ86YC3 692 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 CAMK1DQ8IU85 385 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 PATE1Q8WXA2 126 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 RTP4Q96DX8 246 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 ZNF641Q96N77 438 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-201ENST00000437737 CHP1Q99653 195 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 CTRCQ99895 268 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 DPYSL5Q9BPU6 564 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 MAGEB5Q9BZ81 275 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 ZKSCAN5Q9Y2L8 839 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 EPN1Q9Y6I3 576 aaPredicted RBP14.07□□□□□ -0.16
LINC01088-201ENST00000437737 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
LINC01088-201ENST00000437737 IGHV1OR21-1A0A087WYE8 117 aa14.06□□□□□ -0.16
LINC01088-201ENST00000437737 CFAP69A5D8W1 941 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms