RNA–Protein interactions for RNA: ENST00000437679.3

LIMS3-201, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LIMS3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-201ENST00000437679 GLMNQ92990 594 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 TEKT5Q96M29 485 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 SMIM14Q96QK8 99 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 TRIM10Q9UDY6 481 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 EFR3BQ9Y2G0 817 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 DGKBQ9Y6T7 804 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 EPG5Q9HCE0 2579 aa15.18■□□□□ 0.02
LIMS3-201ENST00000437679 A0A0U1RQS6 177 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 TMEM202A6NGA9 273 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 C1QTNF9BB2RNN3 333 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 H7C0C1 242 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 TNFRSF10CO14798 259 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PYGLP06737 847 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PROS1P07225 676 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 C1QTNF9P0C862 333 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 MYCLP1P12525 358 aaPredicted RBP15.17■□□□□ 0.02
LIMS3-201ENST00000437679 TEAD1P28347 426 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PTPN7P35236 360 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 GPR1P46091 355 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 ATP5OP48047 213 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 STC1P52823 247 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 E2F1Q01094 437 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 DPTQ07507 201 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 XRCC4Q13426 336 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 GALNT3Q14435 633 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 SLC14A2Q15849 920 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PCSK7Q16549 785 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 FAM182AQ5T1J6 154 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 CCDC70Q6NSX1 233 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 TMPRSS12Q86WS5 348 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 HEATR4Q86WZ0 1026 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 GKN2Q86XP6 184 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 RAVER1Q8IY67 606 aaKnown RBP15.17■□□□□ 0.02
LIMS3-201ENST00000437679 NRSN1Q8IZ57 195 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PELI3Q8N2H9 469 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 SDR16C5Q8N3Y7 309 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 CCDC112Q8NEF3 446 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 CCHCR1Q8TD31 782 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 HTR3CQ8WXA8 447 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 AP2M1Q96CW1 435 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PDXPQ96GD0 296 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 QKIQ96PU8 341 aaKnown RBP eCLIP15.17■□□□□ 0.02
LIMS3-201ENST00000437679 LYSMD1Q96S90 227 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 VAT1Q99536 393 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 FERMT1Q9BQL6 677 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 TEX101Q9BY14 249 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 TSGA10Q9BZW7 698 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 CLPBQ9H078 707 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 ABCG8Q9H221 673 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 FGF22Q9HCT0 170 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
LIMS3-201ENST00000437679 CD84Q9UIB8 345 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 MOSPD1Q9UJG1 213 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 PLXNB3Q9ULL4 1909 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 IGF2RP11717 2491 aa15.17■□□□□ 0.02
LIMS3-201ENST00000437679 LRP4O75096 1905 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 C1orf232A0A0U1RR37 186 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 MIF4GDA9UHW6 222 aaKnown RBP15.16■□□□□ 0.02
LIMS3-201ENST00000437679 YY2O15391 372 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 TJP3O95049 919 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 CLDN7O95471 211 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
LIMS3-201ENST00000437679 JUPP14923 745 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 TNNT3P45378 269 aaPredicted RBP15.16■□□□□ 0.02
LIMS3-201ENST00000437679 RPIAP49247 311 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 CDK3Q00526 305 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 CDK18Q07002 472 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 WASHC5Q12768 1159 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 NOMO1Q15155 1222 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 NR0B2Q15466 257 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 C6orf132Q5T0Z8 1188 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 LVRNQ6Q4G3 990 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 ZNF765Q7L2R6 523 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 PID1Q7Z2X4 250 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 KDELC2Q7Z4H8 507 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 NLRP8Q86W28 1048 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 SPATA22Q8NHS9 363 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 OR1E3Q8WZA6 343 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 TADA1Q96BN2 335 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 LGR4Q9BXB1 951 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
LIMS3-201ENST00000437679 CYP4F12Q9HCS2 524 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 PKD2L2Q9NZM6 624 aa15.16■□□□□ 0.02
LIMS3-201ENST00000437679 A0A0U1RQJ8 604 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 FAM149AA5PLN7 773 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 TMEM8BA6NDV4 472 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 ARHGAP6O43182 974 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 PMPCBO75439 489 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 FTCDO95954 541 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 MT-CYBP00156 380 aaPredicted RBP15.15■□□□□ 0.02
LIMS3-201ENST00000437679 CELA2BP08218 269 aaPredicted RBP15.15■□□□□ 0.02
LIMS3-201ENST00000437679 PYGMP11217 842 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 MYF5P13349 255 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 NFKB1P19838 968 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 OTUD4Q01804 1114 aaKnown RBP15.15■□□□□ 0.02
LIMS3-201ENST00000437679 TCEA2Q15560 299 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 HES3Q5TGS1 186 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 ADAMTSL4Q6UY14 1074 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 RFLNAQ6ZTI6 216 aa15.15■□□□□ 0.02
LIMS3-201ENST00000437679 NYAP1Q6ZVC0 841 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms