RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 S1PR4O95977 384 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 KLKB1P03952 638 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ALOX15P16050 662 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 BTKQ06187 659 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 MSLNQ13421 630 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 ART3Q13508 389 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 TRIP4Q15650 581 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 PFKFB4Q16877 469 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 PLA2G4EQ3MJ16 856 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 FSCBQ5H9T9 825 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 MSANTD2Q6P1R3 559 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ZNF549Q6P9A3 640 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 CYP2R1Q6VVX0 501 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 BEND5Q7L4P6 421 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 GALNT4Q8N4A0 578 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ATP6V0D2Q8N8Y2 350 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ACTRT2Q8TDY3 377 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 GDPD5Q8WTR4 605 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 NUDT8Q8WV74 236 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ZNF689Q96CS4 500 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ARPC5LQ9BPX5 153 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 UBE2OQ9C0C9 1292 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 SEMA6AQ9H2E6 1030 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 RC3H2Q9HBD1 1191 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 UTP6Q9NYH9 597 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 MTRRQ9UBK8 725 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ZNF212Q9UDV6 495 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 CDYLQ9Y232 598 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ZFP37Q9Y6Q3 630 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 GREB1Q4ZG55 1949 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 CCDC162PA2VCL2 907 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 IQCF5A8MTL0 148 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 F8W8V4 182 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 RNASEH1O60930 286 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 ACADSP16219 412 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 PAMP19021 973 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 CES1P23141 567 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 FMO4P31512 558 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ATP5C1P36542 298 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 SULT2A1Q06520 285 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 TWF1Q12792 350 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 PRKAA1Q13131 559 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 GK3PQ14409 553 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 LBRQ14739 615 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 UGP2Q16851 508 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 SLC5A9Q2M3M2 681 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 SLC8B1Q6J4K2 584 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 TIGD7Q6NT04 549 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 ACAD11Q709F0 780 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 ZNF683Q8IZ20 524 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 UMODL1-AS1Q8N2C9 162 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 KYQ8NBH2 561 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 TUBGCP5Q96RT8 1024 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 HBEGFQ99075 208 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 COPS7BQ9H9Q2 264 aaPredicted RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 SARS2Q9NP81 518 aaKnown RBP9.48□□□□□ -0.89
CUX1-206ENST00000437600 CLIC5Q9NZA1 410 aa9.48□□□□□ -0.89
CUX1-206ENST00000437600 A0A1B0GVG6 124 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 FAM92AA1XBS5 289 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 HEATR9A2RTY3 570 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 ZNF840PA6NDX5 716 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 H3BMM5 538 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 UBXN8O00124 270 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 OR1I1O60431 355 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 HMGA1P17096 107 aaKnown RBP9.47□□□□□ -0.89
CUX1-206ENST00000437600 PMLP29590 882 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 HOXC13P31276 330 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 RFC2P35250 354 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 CSRP3P50461 194 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 ZNF235Q14590 738 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 AGKQ53H12 422 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 PAOXQ6QHF9 649 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 ISCA2Q86U28 154 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 ARHGAP18Q8N392 663 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 EFHBQ8N7U6 833 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 ZNF461Q8TAF7 563 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 FAM110BQ8TC76 370 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 ECSITQ9BQ95 431 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 IL37Q9NZH6 218 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■■□ 23.3
CUX1-206ENST00000437600 TIMM22Q9Y584 194 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 DOCK4Q8N1I0 1966 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 PATJQ8NI35 1801 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 SDHDO14521 159 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 TLL1O43897 1013 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 GPC4O75487 556 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 IPO13O94829 963 aaKnown RBP9.47□□□□□ -0.89
CUX1-206ENST00000437600 ATXN1LP0C7T5 689 aaKnown RBP9.47□□□□□ -0.89
CUX1-206ENST00000437600 THRAP10827 490 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 SLC2A3P11169 496 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 RHOQP17081 205 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 TACR2P21452 398 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 RANBP1P43487 201 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 POLE2P56282 527 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 PPIGQ13427 754 aaKnown RBP eCLIP9.47□□□□□ -0.898e-7■■■□□ 18.1
CUX1-206ENST00000437600 HABP4Q5JVS0 413 aaKnown RBP9.47□□□□□ -0.89
CUX1-206ENST00000437600 AFMIDQ63HM1 303 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 TXNDC8Q6A555 127 aa9.47□□□□□ -0.89
CUX1-206ENST00000437600 CUZD1Q86UP6 607 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms