RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TSPAN6O43657 245 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 NUDT21O43809 227 aaKnown RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 LRCH4O75427 683 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 LEFTY1O75610 366 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 CALB1P05937 261 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 TPM2P07951 284 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 RHOQP17081 205 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 MAN1A1P33908 653 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ACVRL1P37023 503 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 TSPAN7P41732 249 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 MAPKAPK2P49137 400 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ZNF143P52747 638 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 LIMK2P53671 638 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 OR1D5P58170 312 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 SLC20A2Q08357 652 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ELOAQ14241 798 aaKnown RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 HLTFQ14527 1009 aaKnown RBP eCLIP10.45□□□□□ -0.745e-8■■□□□ 14.2
CPNE1-214ENST00000435747 IQCB1Q15051 598 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ALG11Q2TAA5 492 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 VPS36Q86VN1 386 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 MCOLN2Q8IZK6 566 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ARHGEF2Q92974 986 aaKnown RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ISG20Q96AZ6 181 aaKnown RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 RTP4Q96DX8 246 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 CEP44Q9C0F1 390 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 ATP13A1Q9HD20 1204 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 MRPL40Q9NQ50 206 aaKnown RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 OCIAD1Q9NX40 245 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 LUZP4Q9P127 313 aa10.45□□□□□ -0.74
CPNE1-214ENST00000435747 MDC1Q14676 2089 aaKnown RBP10.45□□□□□ -0.74
CPNE1-214ENST00000435747 CDC14CA4D256 554 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 A6NCN8 305 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 DNAJB5O75953 348 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 CBX6O95503 412 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 PLEKP08567 350 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-214ENST00000435747 FURINP09958 794 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 FERP16591 822 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 GPD1P21695 349 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 ALDH4A1P30038 563 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 L1CAMP32004 1257 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 PRKCIP41743 596 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 STAT5AP42229 794 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 ACAD10Q6JQN1 1059 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 RETSATQ6NUM9 610 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 OGFOD3Q6PK18 319 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 CYP4V2Q6ZWL3 525 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-214ENST00000435747 APLFQ8IW19 511 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-214ENST00000435747 DRC7Q8IY82 874 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 PYROXD2Q8N2H3 581 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 PCDH20Q8N6Y1 951 aaKnown RBP10.44□□□□□ -0.74
CPNE1-214ENST00000435747 FAM46DQ8NEK8 389 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 ANKRD20A12PQ8NF67 263 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 CENPTQ96BT3 561 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-214ENST00000435747 SLC25A23Q9BV35 468 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 SPRY4Q9C004 299 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 TNKS2Q9H2K2 1166 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 FCF1Q9Y324 198 aaKnown RBP10.44□□□□□ -0.74
CPNE1-214ENST00000435747 NBEAL1Q6ZS30 2694 aa10.44□□□□□ -0.74
CPNE1-214ENST00000435747 MYO7BQ6PIF6 2116 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 ANKUB1A6NFN9 424 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 LRRC53A6NM62 1247 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 TMEM110-MUSTN1A8MSY1 372 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 WASH4PA8MWX3 477 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 STK17BO94768 372 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 CDK11BP21127 795 aaKnown RBP10.43□□□□□ -0.74
CPNE1-214ENST00000435747 HTR1BP28222 390 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 PBX1P40424 430 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-214ENST00000435747 PER3P56645 1201 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 SRP54P61011 504 aaKnown RBP10.43□□□□□ -0.74
CPNE1-214ENST00000435747 MAMLD1Q13495 774 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 CARD16Q5EG05 197 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 PLEKHA7Q6IQ23 1121 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 JMJD6Q6NYC1 403 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-214ENST00000435747 ENPP7Q6UWV6 458 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 CEACAM20Q6UY09 585 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 PARS2Q7L3T8 475 aaKnown RBP10.43□□□□□ -0.74
CPNE1-214ENST00000435747 TAF8Q7Z7C8 310 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 SLFN11Q7Z7L1 901 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 TMEM135Q86UB9 458 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 SFTPA2Q8IWL1 248 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 ESX1Q8N693 406 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 RTL3Q8N8U3 475 aaKnown RBP10.43□□□□□ -0.74
CPNE1-214ENST00000435747 Q8NA96 180 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 OR4D9Q8NGE8 314 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 TBC1D31Q96DN5 1066 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 MCEEQ96PE7 176 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 CTRCQ99895 268 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 ZPBPQ9BS86 351 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 CNPY3Q9BT09 278 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 SELENOOQ9BVL4 669 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 C1QTNF7Q9BXJ2 289 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 KLC2Q9H0B6 622 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 MAGEH1Q9H213 219 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 DPEP2Q9H4A9 486 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 AIPL1Q9NZN9 384 aa10.43□□□□□ -0.74
CPNE1-214ENST00000435747 RCOR3Q9P2K3 495 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms