RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ENC1O14682 589 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 PIAS2O75928 621 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 FGGP02679 453 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 TSHRP16473 764 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 CXCR5P32302 372 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 ADRA1AP35348 466 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 GRK6P43250 576 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 THOP1P52888 689 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 KIAA1024LP59773 190 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 NFATC4Q14934 902 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 SLC1A5Q15758 541 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 CCNG2Q16589 344 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 DENND2CQ68D51 928 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 RANBP10Q6VN20 620 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 ERMP1Q7Z2K6 904 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 TMC3Q7Z5M5 1100 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 SLC35F6Q8N357 371 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 RASGEF1CQ8N431 466 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 MAIP1Q8WWC4 291 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 C1orf54Q8WWF1 131 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 FUBP1Q96AE4 644 aaKnown RBP18.34■□□□□ 0.53
HLA-F-220ENST00000434407 CAMK1GQ96NX5 476 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 PPP1R2P1Q96PQ5 205 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 SRPK1Q96SB4 655 aaKnown RBP18.34■□□□□ 0.53
HLA-F-220ENST00000434407 ABCG8Q9H221 673 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 TTC7AQ9ULT0 858 aaPredicted RBP18.34■□□□□ 0.53
HLA-F-220ENST00000434407 BTBD3Q9Y2F9 522 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 AAR2Q9Y312 384 aaKnown RBP18.34■□□□□ 0.53
HLA-F-220ENST00000434407 OR1A2Q9Y585 309 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 F5H423 210 aaPredicted RBP18.33■□□□□ 0.52
HLA-F-220ENST00000434407 GIPC1O14908 333 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 CEP104O60308 925 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 SOD1P00441 154 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 ITGAVP06756 1048 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 HLA-DPA1P20036 260 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 DGKAP23743 735 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 SPINT3P49223 89 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 NOVA1P51513 510 aaKnown RBP18.33■□□□□ 0.52
HLA-F-220ENST00000434407 HNRNPKP61978 463 aaKnown RBP eCLIP18.33■□□□□ 0.52
HLA-F-220ENST00000434407 PARP6Q2NL67 630 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 PPM1JQ5JR12 505 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 SIRPB2Q5JXA9 342 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 CCDC70Q6NSX1 233 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 LYSMD3Q7Z3D4 306 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 GLRX5Q86SX6 157 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 GATAD2AQ86YP4 633 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 SLC25A45Q8N413 288 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 IPMKQ8NFU5 416 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 PBKQ96KB5 322 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 TBATAQ96M53 351 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 WDR24Q96S15 920 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 TEX101Q9BY14 249 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 CAAP1Q9H8G2 361 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 ZFYVE1Q9HBF4 777 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 DNAJC28Q9NX36 388 aa18.33■□□□□ 0.52
HLA-F-220ENST00000434407 GOLGA8CPA6NN73 597 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 KIF5CO60282 957 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 ATP1A1P05023 1023 aaKnown RBP18.32■□□□□ 0.52
HLA-F-220ENST00000434407 FGF1P05230 155 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 PIRTP0C851 137 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 MSNP26038 577 aaKnown RBP18.32■□□□□ 0.52
HLA-F-220ENST00000434407 CHRNA4P43681 627 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 P3H1Q32P28 736 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 INAVAQ3KP66 663 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 ZNF542PQ5EBM4 170 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 KCTD11Q693B1 232 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 PSAPL1Q6NUJ1 521 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 CCHCR1Q8TD31 782 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 RHBDD1Q8TEB9 315 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 SETD7Q8WTS6 366 aaKnown RBP18.32■□□□□ 0.52
HLA-F-220ENST00000434407 SCAMP4Q969E2 229 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 AP2M1Q96CW1 435 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 LGR4Q9BXB1 951 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 TRABDQ9H4I3 376 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 WDR26Q9H7D7 661 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 KCND1Q9NSA2 647 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 NFKBIL1Q9UBC1 381 aaPredicted RBP18.32■□□□□ 0.52
HLA-F-220ENST00000434407 DRG1Q9Y295 367 aaKnown RBP18.32■□□□□ 0.52
HLA-F-220ENST00000434407 ZNF711Q9Y462 761 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 SPO11Q9Y5K1 396 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 ASXL3Q9C0F0 2248 aa18.32■□□□□ 0.52
HLA-F-220ENST00000434407 ZFC3H1O60293 1989 aaKnown RBP18.31■□□□□ 0.52
HLA-F-220ENST00000434407 TNFRSF10CO14798 259 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 METTL18O95568 372 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 AGTP01019 485 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 PYGLP06737 847 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 GIMD1P0DJR0 217 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 JUNDP17535 347 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 HTR1BP28222 390 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 DCDC1P59894 354 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 MSLNQ13421 630 aaPredicted RBP18.31■□□□□ 0.52
HLA-F-220ENST00000434407 PRPSAP1Q14558 356 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 HENMT1Q5T8I9 393 aaKnown RBP18.31■□□□□ 0.52
HLA-F-220ENST00000434407 ADAMTSL4Q6UY14 1074 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 ARHGEF18Q6ZSZ5 1173 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 TTC30BQ8N4P2 665 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 ATL2Q8NHH9 583 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 BTN2A2Q8WVV5 523 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 WDR92Q96MX6 357 aa18.31■□□□□ 0.52
HLA-F-220ENST00000434407 CDC6Q99741 560 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms