RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LOC285095A0A1B0GVY8 99 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 CDX4O14627 284 aaPredicted RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 GAS8O95995 478 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 EPOP01588 193 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 C1SP09871 688 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 ETS1P14921 441 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 FDFT1P37268 417 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 VPS41P49754 854 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 STC1P52823 247 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 TERF1P54274 439 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 PTSQ03393 145 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 OLIG2Q13516 323 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 ZNF542PQ5EBM4 170 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 ALS2CLQ60I27 953 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 DRICH1Q6PGQ1 229 aaPredicted RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 SYT10Q6XYQ8 523 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 PPP1R21Q6ZMI0 780 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 SPATS2Q86XZ4 545 aaKnown RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 PDCD7Q8N8D1 485 aaKnown RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 PRELID2Q8N945 189 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 ATL2Q8NHH9 583 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 SETD7Q8WTS6 366 aaKnown RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 RTP4Q96DX8 246 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 C16orf45Q96MC5 204 aaPredicted RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 LYSMD1Q96S90 227 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 APOOQ9BUR5 198 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 KCND1Q9NSA2 647 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 HACD3Q9P035 362 aa15.5■□□□□ 0.07
TREX1-201ENST00000433541 TTC7AQ9ULT0 858 aaPredicted RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 DRG1Q9Y295 367 aaKnown RBP15.5■□□□□ 0.07
TREX1-201ENST00000433541 DMXL1Q9Y485 3027 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 H3BM21 787 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 TOR1BO14657 336 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SDC3O75056 442 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 PHF2O75151 1096 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 ATXN1LP0C7T5 689 aaKnown RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 ZSCAN5DPP0CG00 497 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 TSHRP16473 764 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 LIMK1P53667 647 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 YPEL5P62699 121 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SEPT6Q14141 434 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SUZ12Q15022 739 aaKnown RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 AGERQ15109 404 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 TRIP13Q15645 432 aaPredicted RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 ZNF423Q2M1K9 1284 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 INAVAQ3KP66 663 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 PAPD7Q5XG87 772 aaKnown RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 ESRP1Q6NXG1 681 aaKnown RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 PNCKQ6P2M8 343 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 CCDC137Q6PK04 289 aaKnown RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 C4orf22Q6V702 233 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 RD3Q7Z3Z2 195 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 PARGQ86W56 976 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SLC22A18ASQ8N1D0 253 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 DNAAF3Q8N9W5 541 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 GRK7Q8WTQ7 553 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SCAMP4Q969E2 229 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 GORASP1Q9BQQ3 440 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SPATA16Q9BXB7 569 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 TRABDQ9H4I3 376 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SUDS3Q9H7L9 328 aaPredicted RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 ETNK1Q9HBU6 452 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 BPIFA1Q9NP55 256 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 PHPT1Q9NRX4 125 aaPredicted RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 RAD18Q9NS91 495 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 DNAAF2Q9NVR5 837 aaKnown RBP15.49■□□□□ 0.07
TREX1-201ENST00000433541 PKP3Q9Y446 797 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 SPO11Q9Y5K1 396 aa15.49■□□□□ 0.07
TREX1-201ENST00000433541 CEP250Q9BV73 2442 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 SPTY2D1-AS1A0A0U1RR47 76 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 K7ESM1 405 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 YKT6O15498 198 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 APRTP07741 180 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 GM2AP17900 193 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 KELP23276 732 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 RPL22P35268 128 aaKnown RBP15.48■□□□□ 0.07
TREX1-201ENST00000433541 COILP38432 576 aaPredicted RBP15.48■□□□□ 0.07
TREX1-201ENST00000433541 PFN3P60673 137 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 ETF1P62495 437 aaKnown RBP15.48■□□□□ 0.07
TREX1-201ENST00000433541 NFATC4Q14934 902 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 PPP1R7Q15435 360 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 HS1BP3Q53T59 392 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 DOK6Q6PKX4 331 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 ENPP7Q6UWV6 458 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 MACC1Q6ZN28 852 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 RFLNAQ6ZTI6 216 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 LINC00523Q86TU6 105 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 HEATR4Q86WZ0 1026 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 NRSN1Q8IZ57 195 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 ZNF592Q92610 1267 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 RIOK2Q9BVS4 552 aaKnown RBP15.48■□□□□ 0.07
TREX1-201ENST00000433541 ABCG8Q9H221 673 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 FAM83DQ9H4H8 585 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 ERVMER34-1Q9H9K5 563 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 PIH1D1Q9NWS0 290 aaKnown RBP15.48■□□□□ 0.07
TREX1-201ENST00000433541 KLQ9UEF7 1012 aa15.48■□□□□ 0.07
TREX1-201ENST00000433541 A0A1B0GTQ1 180 aa15.47■□□□□ 0.07
TREX1-201ENST00000433541 C2orf81A6NN90 581 aa15.47■□□□□ 0.07
TREX1-201ENST00000433541 ERI2A8K979 691 aaKnown RBP15.47■□□□□ 0.07
TREX1-201ENST00000433541 PDE2AO00408 941 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms